Fragaria vesca (woodland strawberry): 105353149
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Entry
105353149 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105353149
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
105353149
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105353149
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
105353149
NCBI-ProteinID:
XP_011470216
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Position
LG7
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AA seq
681 aa
AA seq
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MANPEVAVNVEHLEEEKTQRSVVDEHSELETTATAESVPKDGGDTKEARSCRLSFNTIFN
RNGNFLPMWNNVFVVSCVFTVSFDPLFFYIPIINEKKKCLYFDTRLKTVALVLRLLTDHF
YIADIIMRILTSIRQTKLSKASGVMKAQSESPDLKGKTSVGDVFEIAKRAWAKTNRSYVL
IDILAILPIPQVAMFIFFSKMEGPGWSKERRLFDTLIIFQFVPRVLPVYLLCRERERTLN
KASMWTKGVFNFFLHILASHVLGALWYFFAIQREVDCWHMHSGWQHHNRCQLSTYSSSAG
QDGLRNIPLLDIKCPINLPEEKKGKPFDFGIFADALDSGLVQTTDFPEKFLNCFWWGRQN
LSSLGQNLHTSTYAWENLFAVFISIIGLLLFIYLIGNLQTYLQFATTRSEKLRRKMKTKN
LEVDLWLSRKGLPSNLKVVIMQIIQQKLEQNKDVQVEDTLSVLPSAHSKYIRRYLSLATL
KKVPMLQTMVVRMLKAICEHLTPVDHPEDSYIIREGKQLHQMIFITHGTVQTYKTNGKGG
KIGSKFLEKGDYYGAEELLKWASNFSGHQDLPISTRMVKPVTKVEAFSLSKDDLKSVAIK
YWWNFTKNKDPKDFDQSVLEEFAVSSIEKEIRRRRQVKKKHTIRSLHKLDTQGSASQKLQ
KVISRVMKDQLPSPVGALDGR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccctgaagtagctgtaaatgtagagcacttggaagaagagaaaactcagaga
tcggttgttgatgaacatagcgagttagagactactgcaacggcagaatctgtcccaaaa
gatggaggagatacaaaagaagctagaagctgcaggttatccttcaatacaattttcaat
cgaaatgggaacttccttcctatgtggaacaacgtatttgtagtatcttgtgtgtttact
gtctcctttgatcctttgttcttctacattccgatcattaacgagaagaagaagtgtcta
tattttgacacaaggttgaagaccgtagccctcgtcttacggttactcacagatcacttc
tacattgcggacattattatgcgaattttgaccagtatacgtcaaaccaagttatcaaag
gcttctggggtgatgaaagcacaatcggaatctcctgatttgaaagggaagacatcagtt
ggtgatgtttttgaaatagctaagagggcttgggcgaaaactaatagatcatacgtcctg
attgacattttagctattcttcccataccccaggtggcaatgttcattttcttttcgaaa
atggagggtccgggatggtcaaaagaaagaaggcttttcgacactcttattatattccaa
tttgtcccacgagttcttcccgtttacttattgtgcagagaacgcgagagaactcttaac
aaagcaagcatgtggactaaaggtgttttcaatttcttcctgcacatccttgcaagtcat
gtactcggagctctttggtacttctttgccattcaacgagaggtggattgttggcatatg
cattctggttggcaacaccacaatagatgccaacttagtacctatagttctagcgcagga
caagatggattgagaaatatcccattgttagacataaaatgtccgataaacctgccggaa
gaaaagaaaggaaagccctttgattttggtatatttgctgatgcacttgactccggccta
gtgcagactactgattttcctgaaaaattcttgaattgtttctggtgggggcggcaaaat
ctgagctctctgggtcaaaacctccatacaagcacctatgcatgggaaaacctctttgct
gtgtttatttcgatcataggcttgctattgtttatatatctcatcggaaatttgcagaca
tacttgcagtttgcgactacaagatcagagaagctcagacgaaagatgaaaacgaaaaat
ttagaggttgatttgtggctatcaagaaaaggcctgcctagcaatttgaaggtagtgata
atgcaaatcatacaacaaaaacttgaacagaacaaagatgttcaagttgaggacaccctt
tctgttcttccttcagcacatagtaaatatatcaggcgctatcttagtttggctacactc
aagaaagtgccaatgcttcaaactatggtggtaagaatgctaaaagcaatctgtgaacac
cttacgccggtggaccatccagaggacagttacattatccgagaggggaagcaactccat
cagatgattttcatcacacatggtactgtacagacctacaagaccaatggtaaaggtgga
aaaattggttccaagtttcttgagaaaggggactactatggagcagaagaacttctcaaa
tgggcatccaatttcagcggtcaccaggacttaccaatctcaacgagaatggttaagcct
gtcactaaagttgaagcattttcactgagtaaggacgacttgaagagtgtagccatcaag
tactggtggaatttcaccaagaacaaggatccgaaggatttcgaccagtctgtgttggag
gagtttgcagtatcttccatagaaaaagaaatccgtcgccgcaggcaagtgaagaagaag
catacaataaggtctcttcataagttggatactcagggtagtgctagccagaagttgcag
aaggttatcagtagggtcatgaaggatcagttgccttcacctgttggtgctctagatggc
aggtaa
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