Fragaria vesca (woodland strawberry): 105353277
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Entry
105353277 CDS
T02666
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105353277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
105353277
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105353277
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ResIII
SNF2-rel_dom
AAA_19
Motif
Other DBs
NCBI-GeneID:
105353277
NCBI-ProteinID:
XP_011470597
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Position
LG7
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AA seq
822 aa
AA seq
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MISLFWAGKCGVLVLKFMDYRPVSARTRSKTLLKLNGELKKSSGVTPASRSEKMRRSNQA
SVSHVGESSTRKQSFEWVAGNVEYLDNQQNYEVSVSFDSREGVTKMMMDSDDVEVVVSNG
KEGGRGGVDVDDVSDCGSDEDVSSTEGDDSSDGSVSPTEKKSSEEEYDEESDESVSSTEE
AESDEESVSSSDEDSSEEEKEEETELTGKDEKECKGESVDVGLKRKRNDEDDLHCSYGPD
IDDRSEKVSKGETVEVGLEGKIIDNCDDLHSSSSSSGHDINDRSDPLGQAEAVLAEVRTG
CDKSDDYRDERVWKEQSVGVGSKENRTGDVRNQCKNSEGDSSLTKKKSSRAPIQKRVPTV
AFQPPKVEGLPLRFTFVKQPTIPEKSDYDIEVENLLVEYKFAMAYDNASTILKAKENNFT
RSDNNRNDVNAETYGGSSETAINNGRTSDLQTLLNENEAAKGNHGEMHGGTSESGFTKGS
KFDVQSVCKKGVKAKGNKFSRSNNTGKDDNGETYGDGHLKAYKKKAGVKNLANKKGTRAP
KECNAFSILLDSIYDKEEVSGKKLPHCWDKSLRDEAPKDDAPKDESLPLFFTFGHPPSPP
PEKSDFEIEIDNLFDEYNLVGISGEIGSTDFNVVETNDSVPPGKEVTQHVLCSQGKHNLV
LDEEIGLICRFCRHVHREIKYILPDFAPNPYGKYGKRFYEEGNQSILDDLQCNDHNDSGV
SFHSHTEGTVWDLIPGVESDMYPHQRDGFEFIWRHLAGGTQLKKLAQPTDYEGDGCIISH
APGTGKTRLTIIFIQSYMKFNPLSRPLIVAPRTMLLTWVRGV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgatatctctgttttgggcaggaaagtgtggagttttggtacttaagttcatggattat
aggcctgtctcagccagaacaaggtcgaagacactgttgaaacttaatggggaattgaag
aagagcagtggggtgactccagcctcaagaagtgagaaaatgaggaggtccaaccaggct
tctgtttctcatgtgggtgagtctagtactaggaaacagagttttgagtgggttgctggt
aatgtggaatatctggataatcaacagaattatgaagtttcagtgagttttgattctcga
gagggtgtcacaaagatgatgatggatagtgatgatgttgaagtagtagtttctaatggt
aaagagggaggaagaggaggagttgatgttgatgatgtgagtgattgtggaagtgatgag
gatgtgtcatcaacagagggagacgacagtagtgatggaagtgtgtctccgacagaaaaa
aagtcctctgaggaagaatatgatgaggaaagtgatgaaagtgtgtcctcgacagaggag
gcagaatctgatgaggaaagtgtttcctcatcagatgaagacagcagtgaggaggaaaag
gaagaggagaccgagttgacagggaaggatgagaaagagtgcaaaggagaaagtgtggat
gttggtttgaagagaaagagaaatgatgaggatgatctgcattgttcttatggtccggat
attgatgacagaagcgagaaagtaagcaaaggggaaactgttgaggttggtctggaagga
aagataattgataactgtgatgatctacattcttcttcttcttcttctggtcatgatatc
aatgacagaagtgatccattggggcaggcagaggctgtcttggctgaagtgagaaccggg
tgtgataaaagtgatgattacagggatgagagagtttggaaagaacaaagtgttggtgtt
ggttcaaaagaaaacagaactggtgatgtgcgtaatcaatgcaaaaattctgaaggggac
agttcccttaccaagaaaaagagctcaagggcaccaatacagaaaagggtacctactgtt
gcatttcaacccccaaaagttgaaggtcttcctttgaggttcacttttgttaagcagcca
actattcctgagaagtcagactatgacatagaagttgaaaaccttttggtcgaatataaa
tttgctatggcatatgacaatgcttctactattttgaaggctaaagaaaacaactttaca
agatctgataataacagaaacgatgtcaatgctgagacctatggtggtagttcagagacg
gcaattaataatgggagaacaagtgatttgcagacgttactcaacgagaatgaagctgcc
aaaggaaatcacggtgagatgcatggtggtacttcggaatctggtttcactaaaggcagt
aaatttgatgtgcagagtgtttgcaagaagggtgtcaaggccaaaggaaacaagttttca
aggtccaataatacaggaaaggatgacaatggtgagacatatggtgatggtcatctgaaa
gcatataagaagaaagcaggggttaagaatcttgccaacaaaaagggcactagagcacca
aaagagtgcaatgcgttttcgattcttttagattcaatttatgacaaggaagaagtgtca
gggaaaaaattacctcattgttgggataaatccctcagagatgaagctccaaaagatgat
gctccaaaagatgagtctcttccattgtttttcacgtttggtcatccgccaagtcctcca
ccagagaagtcagattttgagatagaaatagataacctttttgacgaatataacttagtc
ggtatatctggcgagattggttccactgattttaatgtggttgaaactaatgactcagta
cctcctggtaaggaagttactcagcatgtcctttgtagtcaagggaaacacaatcttgta
cttgatgaagaaataggacttatatgtcgattctgccgtcatgtgcatcgggagatcaaa
tatattttaccagactttgctccaaacccttatggaaaatatgggaagaggttctatgaa
gaaggcaatcagtctatccttgatgatcttcagtgtaatgaccataacgattctggagtt
agtttccattctcatactgaaggcacagtgtgggacttgatccctggtgtggaaagtgat
atgtatcctcatcagcgtgatggttttgaatttatttggaggcacttagcgggtggaact
cagcttaaaaagttggcacaacctactgattatgaaggtgatggatgcattatatcacat
gcacctggaactgggaagactcgtctgactatcatctttatccagtcatacatgaagttc
aacccattaagcaggccactcatagttgctccacgcaccatgctccttacttgggtaaga
ggagtttaa
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