Fannyhessea vaginae: I6G91_00105
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Entry
I6G91_00105 CDS
T06963
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fvg
Fannyhessea vaginae
Pathway
fvg03410
Base excision repair
fvg03430
Mismatch repair
fvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6G91_00105 (recJ)
03430 Mismatch repair
I6G91_00105 (recJ)
03440 Homologous recombination
I6G91_00105 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvg03400
]
I6G91_00105 (recJ)
DNA repair and recombination proteins [BR:
fvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
I6G91_00105 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I6G91_00105 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I6G91_00105 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecJ_OB
DHH
DHHA1
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
QPR41754
LinkDB
All DBs
Position
26554..30096
Genome browser
AA seq
1180 aa
AA seq
DB search
MIGSTQHNRWQLLSRDLELEDKLINTCRLPRLVARVLVSRGYTTQEQIERFLIASLERDW
VNPLFIPGLAAVADRVQHALDSHERIVVFGDFDVDGICATALLTDALKTLGACVYPFIPS
RVHEGYSLSKAAFDRLVAAYNPNLIITVDNGIDAHEQCLYSIQHGVDVVITDHHEPTSQT
LPVVPTANPKLNPSCASFELAGAGVALKLVDVLGAAYGKPYLWKDYLDVATLGTISDRVK
LTPENRALVTEGIRCIRASSRLGLSALARVCGIDIHATMPEELASSLIPRLNAAGRLDRV
QTAYNLLQAQSLSEAYTYANELEELNICRRNLEKKACDEAFEQAKDVVKQQKHVIFVSSS
QWNEGVIGIVASRLARAYELPAFACSIAQGSAKCSGRSVGNVNLFDVVERFGSQLIRFGG
HAAAVGFTCSPDILPTIIQHVERTIDALPASALYAPRELVIPVDLSEITVSDLDSLEMLQ
PFGSGNERPIFAAHNIEMRNKMRVGAHNNHMRFVAQQHKVRLSSIVFKASHIQNLMSLHD
TCDIVFNPVNEVWQGRVKPKLMIKDIIVRKQDTKHAHCDTCAFSRLSLPQRELDSELNHE
SLALRRELEQKTDDELENFLRTQLIGDHALLPVQAYALNMLRHNNNCLCVMATGRGKSLI
FQLFACMCAIKRKGLSIFVYPLRALVNDQSYHISDVCSKFGVRVCVLNGETPQSKRLEIY
QHIKDGTCDIVMTTPEFLALHAHEFAGTTAFVVFDEAHHMAEAKRGTRSAYSCMPQVLDV
LGNPVTLAVSATVSTDCAREILRLAHIRAQHVILDDSQRSNLDIIDRRNASNRDEILVNL
IADGEKTVVYVNSRIKALQLVHILRHRLPEFAPQIAFYHAGLSRDVRVQVQTAFRAGDLI
AVIATSAFGEGVNISDIRRVVLYNMPFTAHDFNQMSGRAGRDHKPSEIYALYTKHDIASA
RYILSTTAPCADDLQCIYTALVQTARKGVASKVLPKDSHDEDATVATVTVLLKDVQDATT
WCDISRSHGASCSSVACEKSDSECARTERTNEVLHARTQKEKGHAPAYSVSTIEAALQIF
KELKLIDYNAHTLSQADVALQRVTLTFNHADIFDLSDTLPTIPVMLEKSIRYVEGLRMWE
EFDQMSAWAHAATRAEMLARVQKPILPAFGNIVDERVAHE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgattggttcaacgcaacataatcgctggcaactgttatccagagatcttgagcttgaa
gataagcttataaacacgtgcagattgcctcggcttgttgcgcgtgttttggtatcgcgc
ggctatactacacaagaacagatcgaacgctttttaattgcttcgcttgaacgtgattgg
gtaaatccgctctttattccaggtttagcagccgtggcagaccgcgttcagcatgcgctt
gattcacatgagcgtattgtggtgtttggtgattttgatgtagacggtatatgtgcaaca
gcactcttaaccgatgcacttaaaacgcttggcgcatgcgtgtatccgtttattccaagc
cgcgttcatgagggctatagcctttctaaggctgcgtttgaccgtcttgtagcggcgtat
aaccccaatcttattattaccgttgataacggtattgatgcacatgagcagtgcttatat
agtattcagcatggtgtagatgtggttattaccgaccaccacgaacccacttcgcaaacg
cttcccgtggttcccaccgcaaatccaaagcttaacccatcgtgcgcatcattcgaactt
gctggcgcaggtgttgcgcttaagcttgttgatgtgcttggtgctgcatacggtaagcct
tatctatggaaagattatcttgatgtggcaacgcttggaactatttccgatcgtgtaaag
cttaccccagaaaatcgcgctttagttaccgaaggtattcgttgtattcgtgcgtcaagc
cgtttgggcttaagtgctcttgctcgtgtgtgcggaattgatattcatgccacgatgccc
gaggagctcgcaagttctttgattccacgccttaacgctgcaggaaggcttgatcgtgtt
caaacagcatataatttgttgcaggcacaaagtttaagtgaagcatatacgtatgcaaat
gagcttgaagaattaaatatttgccgtagaaatcttgagaaaaaggcttgcgatgaagca
tttgaacaggcaaaagatgtggttaagcagcaaaaacatgtaatatttgtttcaagttcg
caatggaatgaaggcgttataggcattgtggcttctcgtcttgcgcgtgcttatgaattg
cccgcgtttgcgtgctcaattgcccaaggtagtgcaaaatgttcgggaagaagcgttggc
aacgttaatctttttgacgttgttgagaggtttggatcgcagcttattcgttttggtgga
catgctgcagcagtaggatttacgtgttcgcctgatattcttcctaccataatccaacac
gttgaacgcacgatcgacgctttgcctgcctcggcgttgtatgcaccacgtgaactggtt
ataccagttgatttgtccgaaattaccgtatcagatcttgattctttagaaatgttgcaa
ccttttggatcgggcaacgagcgtccaatttttgcagctcacaacattgaaatgcgcaat
aaaatgcgtgttggcgctcataataatcatatgcgctttgttgcacagcagcacaaagtg
cgcctctcgtccattgtttttaaggcatctcatattcaaaatcttatgtcgttacacgac
acctgtgatattgtctttaaccctgttaatgaggtttggcaaggtcgcgttaagcctaag
ctcatgattaaagatattattgttcgcaaacaggataccaaacatgcacattgcgatacc
tgtgcgttttctcggctgagccttcctcaaagagagcttgatagtgagcttaatcatgag
tcgctggcattgagacgcgaacttgagcaaaaaactgatgatgagcttgaaaactttttg
cggacacaactcatcggtgaccatgcgctcctgcctgttcaagcatatgcgcttaacatg
cttaggcacaacaacaactgtttgtgcgttatggcaaccggtcgaggaaaatctttgatt
tttcagctgtttgcatgtatgtgtgcaattaaacgtaagggtttaagcatttttgtgtat
ccgttgcgcgcccttgtaaacgatcaaagctatcatataagtgatgtgtgctcaaaattt
ggcgtgcgcgtttgcgtacttaacggagaaacgccccagtcaaagcgtttagagatctat
caacatattaaagatggaacctgcgatattgtaatgaccacgcccgagtttttggcactt
cacgcgcacgagtttgcaggtactactgcttttgttgtgtttgatgaagctcatcatatg
gccgaagcaaagcgtggtacacgcagcgcatatagttgtatgccgcaggtacttgacgtg
cttggtaatcccgttaccttggcagtcagcgcaacggtttctaccgattgtgctcgtgag
attttacgacttgcacacatacgtgcacagcatgttattttggacgattcccagcgctct
aatttagatattattgatagacgcaacgccagcaatcgtgacgagatattggttaacctt
attgccgacggcgaaaaaactgttgtgtatgttaattcccgtataaaagctttgcagctt
gtgcatattttgcgtcatcgtctacctgaatttgcaccacaaattgcgttttaccatgct
ggtttatcgcgagatgtgcgcgtacaagtgcaaacggcttttcgcgcaggtgatcttatt
gcagttatagctaccagtgcttttggcgagggagttaatatttctgatattcgccgtgtt
gttctgtataatatgccctttactgcgcacgattttaatcagatgagtgggcgcgctgga
agagatcataaaccatctgaaatttatgctctctacaccaaacacgatattgcttctgca
cgatatatcttgtctacaactgctccttgtgcagatgatttgcagtgcatttatacagca
cttgtgcaaaccgcgcgaaaaggggtggcttccaaggtattgcccaaagactcccacgat
gaggacgctaccgtagccaccgtaactgttttgcttaaagacgtacaagacgccacaact
tggtgtgatatttcccgttcacatggcgcatcttgtagttcagtcgcatgtgaaaaatcc
gattctgagtgcgctcgtacagagcgcacaaacgaagtacttcacgctcgcacgcaaaaa
gaaaaggggcatgcacctgcatatagtgtgtctaccatcgaagctgctttgcagattttt
aaagaattgaagcttattgattacaacgcgcataccctttctcaagccgatgttgcccta
cagcgtgtaacacttacctttaatcatgctgatatatttgatttatcagacactttaccc
acgattcctgttatgcttgagaagtcgatacgctatgttgaaggcttgcgtatgtgggaa
gagtttgatcaaatgagtgcgtgggcacacgcggcaacgcgcgccgagatgctcgctcgt
gttcaaaaacctatccttcctgcatttgggaacattgtagacgaaagagttgctcatgaa
taa
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