Fannyhessea vaginae: I6G91_03465
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Entry
I6G91_03465 CDS
T06963
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fvg
Fannyhessea vaginae
Pathway
fvg03030
DNA replication
fvg03430
Mismatch repair
fvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6G91_03465 (dnaE)
03430 Mismatch repair
I6G91_03465 (dnaE)
03440 Homologous recombination
I6G91_03465 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fvg03032
]
I6G91_03465 (dnaE)
03400 DNA repair and recombination proteins [BR:
fvg03400
]
I6G91_03465 (dnaE)
Enzymes [BR:
fvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6G91_03465 (dnaE)
DNA replication proteins [BR:
fvg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6G91_03465 (dnaE)
DNA repair and recombination proteins [BR:
fvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6G91_03465 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
GSIII_N
RHA1_ro05818_N
Motif
Other DBs
NCBI-ProteinID:
QPR41280
LinkDB
All DBs
Position
complement(831915..835823)
Genome browser
AA seq
1302 aa
AA seq
DB search
MAFVHLHNHSFFSVLDASTSIQNMVDAAVAQHMHALALTDHAYMFGIPDFDLACRKYNDN
AADMKQYKHDVECYEKQWDNKEPKPDDPDAAPHDRCHAQWEKDKRVWDETHDIERVRAQK
PELLIKPIFGCEANLIPDQCIEKGTPQKRYHLTLLVKNAVGYVNLMKMMSLAANQMMYYK
PRTTFAMLEKYHEGLICLSGCAHGVIAQMIVTQQYDAARAWAQKFKALFGDDFYLEIQDH
GVSLDSWNGMSEQMIAQRIVQLGKEEGIAVVATNDNHYFHQDDVETRDILSCIGANTHLD
ENYQSTLPGSEFYFKSEEQMRALFAWVPEAVDESVRIAAKCSFELDWTHMYLPKFPGLRE
GETSEERFRSECEQGLARKYGKQWQDVTINGVNVKERFEYEYGVICFKGFADYFLIVQEY
VRWAKEHGIGVGPGRGSAAGAIVAYAMDITAFDPLENGLMFERFLSLERTEMPDIDMDFD
DERRLEVVQHVRELYGSDRVCHVITYSTIKAKQAINDAARVLGYPVATAQKLSKMVSSDP
KTKLKFVLSKTEGKEDMYNPDFVDAYHNNGDEHRIIDAARSIEGIIRGEGVHACAILIAP
TPVNDHVPTKLDTKGGVEITQYEGHSVADMGLLKMDFLGLRTLTVISKALDNIRASYPDL
SKLDSLGDGVKACLKPGATCIDIDPQKIPFTDPRIFQLVGSGRTAGVFQIESEGMTATIK
NMKPKEFRQIVALIALYRPGPLGAGMVTSYINRMNGREPVVFYDDRLSDILDETYGTIVY
QEQVMQISVKMSGFSKGESDSKIRKPVAKKKIALLTSTIFHWENGRDETTYDHWMNGASA
NGYKKEVAQRIWDDVLEFASYAFNKSHSAGYAILVMQTAWLKAYFPREYMASVLTSYMGK
TNKIVHYISACNHEGIKILPPDINESGRDFTATPQGIRFGFAGIRGVGENVGIAIMQERK
KNGPFANLHDFVKRVNSAQANRRVVEALIKAGAFDSCGYPRKQLMGFIDKNNPKNIIDEA
ARHEKDRSMGQLSLFDYFGTVEGSGFEEKIPPADPHDRWEDGFMLSQEREVLGIYVTDHP
LRPYQVALRRSRDFTLSELEESKEVIDEQSGATHLEYKVPEGKTIHLAGMTATGLIQRRL
TKTGKQMAIVTLEDMEGQIPLVVFPKVFEASSALLKGEVLESLDSSGENIFIKVTGKLER
GERGNQVIVETLAPLQLSGAINSIHVIEIGLSTSKLSTPYFEMLRSVLVRYPGLDRVELL
YESSAHDIMHMELPLTVDACDPLLKAEIEDMFGSDCRVSVFI
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgttcatttgcataatcattcgtttttttctgttttggacgcatcaacttcc
attcagaatatggtggacgcagcagttgctcaacacatgcacgcgcttgcacttaccgat
catgcgtatatgtttgggatccccgatttcgatttagcatgcagaaaatataacgataat
gctgccgatatgaagcagtacaagcacgacgttgaatgctatgaaaaacagtgggataac
aaagagcctaagccagatgaccctgacgctgcgcctcacgatagatgtcatgcacaatgg
gaaaaagataaacgcgtatgggatgaaacgcatgatatcgagcgcgttcgtgcacaaaaa
cctgagcttcttattaagcctatttttggatgtgaggcaaacctcattcctgatcagtgt
atcgaaaaaggaacgccgcaaaaacgttatcacctaacgcttttggtaaagaatgctgtg
ggctacgttaacttaatgaaaatgatgtcacttgcggcaaaccaaatgatgtattacaag
cctcgtactacgtttgccatgttggaaaagtatcatgaaggccttatttgtttaagcggt
tgtgcgcatggtgttatcgctcaaatgatagttacgcagcaatacgatgcagcgcgcgcg
tgggcacaaaaatttaaagctttgtttggtgatgatttttatcttgaaatccaagatcac
ggtgtttctttggattcttggaacggtatgtccgaacaaatgatcgcacaacgcattgtt
cagctgggaaaagaagagggaatagctgttgttgcaactaatgacaatcattattttcat
caagatgacgttgaaacgcgcgatatcttaagctgtattggtgccaacacccacctcgac
gaaaattaccagtcaacgcttcccggttcggagttttattttaagtccgaagaacaaatg
cgcgcactgtttgcatgggttcctgaggccgtagacgaaagcgttcgcatagccgcaaaa
tgttcgtttgagcttgactggacgcacatgtatcttcctaagtttcctggtttgcgcgaa
ggtgaaacatcagaggagcgtttccgtagcgaatgcgaacaaggtttggcgcgtaaatac
ggcaaacaatggcaagacgttaccattaacggtgtaaatgtaaaagaacgttttgaatat
gaatatggcgttatttgttttaagggttttgctgactactttttaattgttcaagaatat
gtccgatgggcaaaagagcatggtattggtgtaggccctggtcgtggttctgcggcaggt
gctattgttgcatacgctatggacattacggcatttgacccgcttgaaaacggcctgatg
tttgagcgtttcttgtcgcttgagcgtaccgagatgcccgatattgatatggacttcgac
gatgagcgtcgtttggaagttgtgcaacatgttcgtgaactgtatggttctgatcgtgtg
tgtcacgttattacgtactcaaccattaaggcaaaacaggcaattaacgatgccgctcgt
gttttggggtatcccgttgcaactgcgcaaaaattgtccaaaatggtttcaagtgaccca
aagactaagctcaaatttgtgctttcaaaaactgaaggcaaagaggacatgtataacccc
gattttgtggatgcttaccataataatggtgatgagcaccgcattattgatgctgcgcgc
tctattgaaggtatcattcgtggcgaaggcgtgcatgcctgcgctattcttattgcacca
acacctgttaatgaccacgttcccactaagcttgacaccaaaggtggcgtagaaattacc
caatacgaaggacattccgttgcggatatgggtctgttaaagatggactttttgggtttg
cgtaccttaaccgttatttctaaagcacttgataacattcgtgctagttatcccgactta
agcaagcttgattctttgggtgatggagttaaagcttgccttaaaccaggagctacttgc
attgatattgatccgcaaaaaataccttttaccgatccgcgcatttttcagttggttggt
tcgggacgaactgctggcgtgttccaaattgaatcggaaggcatgacagcaaccatcaaa
aatatgaaaccaaaagagtttcgccaaattgtagctttaattgccttgtatcgtccggga
cctttgggtgcaggcatggtaacaagctacattaaccgtatgaacggtcgtgaacctgtt
gtcttttatgatgacagactttcagacattttggacgaaacatacggaactattgtatat
caagagcaggttatgcagatttcggtaaaaatgagtggtttttctaaaggagagagcgac
tctaaaatcagaaaacctgttgcaaagaaaaaaattgcgcttttaaccagtaccattttt
cactgggaaaacggtcgagatgaaacaacgtatgaccactggatgaatggtgcaagtgca
aacggctataaaaaagaagttgcacaacgtatttgggacgatgttttggaatttgcgtcg
tatgcgtttaacaaatcgcactctgcaggctatgctattttggttatgcaaacagcctgg
ttaaaagcatattttccgcgtgaatacatggcgtcggtacttacatcgtatatgggtaaa
accaacaaaattgtccactatattagtgcatgtaatcacgagggtattaaaattttgcct
cctgatattaacgagtctggtcgtgattttacggcaacaccacaaggaattcgttttgga
tttgctggtattcgcggtgttggtgaaaatgttggtattgctattatgcaagaacgcaag
aaaaacggcccatttgcaaatttgcatgattttgtgaagcgcgttaattctgctcaggca
aaccgccgtgttgtagaagctcttatcaaggctggtgcgtttgattcgtgtggctatcca
cgcaagcagcttatgggatttattgataaaaacaatcctaaaaatattatagatgaggct
gcacgtcacgaaaaagatcgttcgatgggacaactgtcgctgtttgattattttggaacg
gttgaaggatcgggatttgaagaaaaaattcctcctgcagatccgcatgatcgctgggaa
gacggatttatgctttcgcaagagcgcgaagtattaggtatttatgttaccgaccaccct
ctgcgcccgtatcaggttgctttgcgtcgttcgcgtgattttaccttaagtgagctggaa
gaaagcaaagaagttattgacgagcaaagcggcgccacgcatttggaatataaagttccc
gaaggaaaaacaatacatttagcaggcatgacagcaacaggtcttattcagcgtcgcctt
actaaaacgggaaaacagatggctattgttacgctcgaagatatggaaggacaaattcct
ttagttgtatttcctaaggtgtttgaggcttcatctgcgctgcttaaaggtgaagttttg
gagtcgcttgatagcagtggcgaaaatattttcatcaaagttactggtaaacttgagcgt
ggcgagcgaggtaatcaagttattgtagagactttggcaccgcttcagctttcgggtgca
attaactcaattcatgttatagaaatcggcctttctacgtcaaaactctctacgccttat
tttgaaatgctgcggagcgtgcttgtgcgctatcctggacttgatagggttgagttgctg
tacgaaagttcggcacatgatattatgcatatggagttacctcttacggtagatgcgtgc
gatccgctgctcaaggccgagattgaggatatgtttggttcggattgtcgagtgagtgtg
tttatctaa
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