Fannyhessea vaginae: I6G91_04015
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Entry
I6G91_04015 CDS
T06963
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fvg
Fannyhessea vaginae
Pathway
fvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6G91_04015 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvg03400
]
I6G91_04015 (xth)
Enzymes [BR:
fvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
I6G91_04015 (xth)
DNA repair and recombination proteins [BR:
fvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
I6G91_04015 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QPR41380
LinkDB
All DBs
Position
999082..999861
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AA seq
259 aa
AA seq
DB search
MSQKHPYRFVSWNVNGLRATLKKEPSFLEIFSTLNADIFAIQETKLQAGQVDLDLDGYTQ
TWSYAERKGYSGTAVFSREKPLSTIHTIGCKAADNEGRVCALEFEKFWFVDVYTPNSKNE
LARLDERMEWDKAYREFLVGLDAQKPVITCGDFNVAHQEIDLKNPASNHENAGFSDEERA
GFSSLLGAGFTDTFRSAHPTLEGAYSWWSYRMRSRERNAGWRIDYFLVSNRIANTVTSSA
IYNEIYGSDHCPVGLELEL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaacacccgtatcgttttgtatcgtggaatgtaaacgggcttcgagcgacg
cttaaaaaagaaccaagttttttagaaattttttcgacactcaatgccgatatttttgcc
atccaagaaacaaaattacaggcaggacaagtagatctcgatttggatggatatacgcaa
acatggagctatgctgagcgtaaaggttattcgggaacagctgtcttttctcgtgaaaag
cccctatcaaccattcataccataggctgcaaggcagcagataacgaagggcgtgtttgt
gctttggagtttgaaaagttttggtttgtagacgtttacacgcccaactctaaaaacgag
cttgcccgcctggatgagcgcatggaatgggataaggcgtatcgcgaatttttggtaggt
ttagatgctcaaaaacccgttataacctgcggtgactttaatgttgcacaccaagaaata
gaccttaaaaacccagcgtcgaatcacgaaaatgcaggcttttctgatgaagagcgcgca
ggcttttcgagccttttaggtgcaggatttaccgacacctttagatctgcacaccccacg
cttgaaggagcatacagctggtggagttatcgcatgcgttcgcgcgaaagaaatgcaggc
tggagaatcgactattttcttgtttcaaacagaatagccaacacggttacctcaagtgcc
atttataacgagatatatggaagtgaccattgtcctgtaggccttgagcttgagctgtaa
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