Fannyhessea vaginae: I6G91_05360
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Entry
I6G91_05360 CDS
T06963
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fvg
Fannyhessea vaginae
Pathway
fvg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6G91_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvg03021
]
I6G91_05360
03400 DNA repair and recombination proteins [BR:
fvg03400
]
I6G91_05360
Enzymes [BR:
fvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6G91_05360
Transcription machinery [BR:
fvg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6G91_05360
DNA repair and recombination proteins [BR:
fvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6G91_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QPR41614
LinkDB
All DBs
Position
1305122..1309579
Genome browser
AA seq
1485 aa
AA seq
DB search
MADFDSTDFDAIKISLASADDIRGWSCGEVKKDETINYRTLKPEKDGLFCEKIFGPVKDW
ECACGKYKGIRFRGIVCERCGVEITSAKVRRDRMGHIELAAPVSHIWYFKSPATFPLARL
LDMKSKDLEKILYFASYVITEVDTEAREQDAQDLKEELQADLEELDAECEDEIARLRAQG
ESSDDDPEFSDLEPLSAEEIERGIVDLREEYADEKRLRKEAFTKFMQLECRELISDESLF
SEMRRYYKMYFKGDMGAGAIRDLLHSVDLEKEATELRKIIASDDSQKQRRERAVKRLEIV
DAFLKGNNDPANMILDVIPVIPPDLRPMVQLDGGRFAASDLNDLYRRVINRNNRLKRLLN
LDAPAIIVNNEKRMLQESVDALFDNGRRGRPVTGRGGRPLKSLAESLKGKQGRFRQNLLG
KRVDYSGRSVIVVDPRLKLHQCGLPSVMALELFKPFVMRRLVELNKAENIKGAKRAIDRG
SAMVWDILDEVIRGRLVLLNRAPTLHRLSIQAFEPVLVEGKAIHLHPLACAPFNADFDGD
QMSVHVPLSTQAQTEARVLMLSSNNLRSPASGKVLNIPSQDMVFGVYFLTTQKDGLAGEK
RVFSDFDDALASYNALTGIDIQARIFVRLTAADANATVDGKPYFRTYSARGKLEEIDLSG
DPVRFETTIGRIIVNRQCLPDDYPYMNFKMAKGDIATLVNDCCDRYTLSRVEPILDAIKH
VGFHYATQAGLTVSVWDAIIPDDKPQLLEEAQGKVDQINEYYEDGFLSEKERHSEVINVW
TDCTEHLGSEMLEGFSEDNPIYMMADSGARGSKTQLRQLAGMRGLMADMSGDTIDLPIKA
NFREGLEPLEYFISTYGARKGLVDTASHTSDSGYLTRRLVDVAQDVIVREEDCETVDGVT
YKLIKPGENDVDMDLVGRCVLQDICDPNTGEVLFAKDSYISSKQDLQKLVDAGLKSVVLR
ALLTCKSRYGVCQKCYGWDLSTRRPVNIGTSVGIIAAQSIGEPGTQLTMRTIHSGGVAGA
EDITQGLPTVARMFDVVGNVNEKILGREADLAAFSGILHITPEQTEYQISITDKDDESRI
LAQWRVPASVRFMPGIEDGCEVEPGDQITRGFVNFRVLRSLTGIEETMHTFVKSVKDVYT
SQGVDLNDKHIEVIARQMLRRVQITNPGDSQYLLGQYVDRYVFANTVANISAAGGKVPEA
EAVILGTLKVASSIDSWLSSASFIRTAGVLTESAIKGETDHLLDLKSNVIAGKKIPAGTG
LKAYDDVQLTYKGQAIDGPTSPNAKALPDWAPDELKDIEEQLPKQLDWIGEDYSNNGVYS
KNGRSLSTEDAKLYLFDDLGVSQRWTNKFSEVGIETVGDLIGKTEDELLRIDGIGAKAIE
ELREGLEARNLLYILEPDEDEADSEDLSQLLNMVFSPDPDNDIMLGTAAPATHHFTEDEF
IGGADSDEHDNSEDSDIINEDLDSLGDLLSSVMKQDSADSDKQDE
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
gtggcagactttgattccacagatttcgatgctatcaagatttcccttgccagcgcggat
gacattcgcggttggtcatgtggtgaagtcaagaaagacgaaacaatcaactaccgcacg
cttaagcctgaaaaggacggacttttctgcgaaaagatttttggtcctgtaaaagactgg
gaatgtgcctgcggtaaatataaaggtattcgctttagaggcattgtttgtgagcgttgt
ggtgtagaaattaccagcgcaaaggttcgtcgtgatcgcatgggtcatatcgaactggct
gctcctgtttcgcacatttggtactttaagagcccagcaacgtttcctcttgcccgcctt
ttggacatgaagagcaaagaccttgagaaaattctttactttgcgtcctacgttattacc
gaagttgacaccgaagcacgcgaacaagatgctcaagaccttaaagaagagcttcaagcc
gaccttgaagaacttgatgcagagtgtgaagacgaaattgcacgtttgcgtgcgcaaggc
gagtcatcagacgatgatccagagtttagcgatttagagccgctttctgccgaagaaatt
gaacgcggtattgttgatcttcgcgaagagtacgcagacgaaaaacgcttgcgcaaagag
gcgtttaccaagtttatgcagcttgagtgccgtgagcttatttctgatgagtcgctgttc
agtgaaatgcgtcgttactacaagatgtactttaagggcgacatgggtgcaggtgctatc
cgtgacctgttgcacagcgttgatctggaaaaagaagcaaccgaattacgtaagatcatt
gcttctgacgattctcaaaagcaacgtcgtgagcgtgcggtcaagcgtttggaaattgtt
gacgcatttttgaagggtaacaatgaccctgccaacatgatcctcgacgttatccctgtt
attccacctgatttgcgtcctatggtacagctcgacggtggtcgttttgcagcgtctgac
ttaaacgatttgtatcgtcgtgtcatcaaccgcaacaaccgcttaaagcgtttgcttaac
cttgatgcgcctgcaattattgtaaataacgaaaaacgtatgctccaagagtcggtagac
gcactgtttgataacggtcgtcgtggacgtcctgtaactggtcgtggcggccgcccctta
aagtctttggcagagtcgcttaaaggtaaacaaggtcgtttccgtcaaaacttgcttggt
aagcgcgtagactattctggtcgttcggttatcgttgttgacccacgtcttaagcttcac
caatgcggtttgccttcagttatggctcttgagctctttaagccctttgttatgcgccgt
ttggtagaacttaacaaagccgaaaatattaagggtgcaaagcgcgctatcgaccgtggc
tctgctatggtttgggatattttggacgaggttattcgcggtcgtttggtactgcttaac
cgtgctccaacgcttcaccgtctgtcaattcaggcatttgagcccgttttggtagaaggt
aaagccatccacttacatccattggcgtgtgctccgtttaacgcagacttcgacggtgac
caaatgtcggttcacgtgccgctttctacgcaggcacaaaccgaggcgcgcgttcttatg
ctttcaagcaataacttgcgctcacctgcatcgggtaaagtgttaaatattccatcgcaa
gacatggtctttggtgtgtacttccttactacgcaaaaagatggccttgctggtgaaaag
cgcgtattctctgattttgatgatgcgttggcgtcttataacgctcttactggtatcgat
attcaagcacgcatttttgtacgccttaccgcagcagacgcaaatgcaaccgttgatgga
aagccttatttccgcacgtattctgctcgtggcaagcttgaagaaatcgatttaagcggc
gatcctgttcgttttgaaacaacaatcggacgcattattgttaatcgtcaatgcctgccc
gacgactatccttatatgaactttaagatggctaaaggcgacattgctactttagttaac
gattgctgcgaccgttatacgctttctcgcgtagagcccattttggacgccattaagcac
gtgggcttccattatgcaactcaggcaggcttaactgtttctgtttgggacgctattatt
ccagatgataaacctcagcttttggaagaagcacaaggtaaagtagaccaaattaacgag
tactacgaagacggcttcttgtcagaaaaagagcgccacagcgaagtaattaacgtatgg
accgattgcaccgagcacttgggttctgagatgctcgagggctttagcgaagacaacccc
atttacatgatggcagattcgggagctcgtggttctaaaacacagcttcgtcagcttgct
ggtatgcgtggtttgatggccgatatgtctggtgataccatcgacttgcctattaaagca
aacttccgcgagggtctggagccgcttgagtacttcatttctacctatggcgcacgtaaa
ggtttggtagatacggcatcgcacacctctgactctggttacttaacacgtaggctggta
gacgttgcgcaagacgttattgttcgcgaagaagactgcgaaaccgtagacggcgtaacc
tacaagcttattaagccgggcgaaaacgatgttgatatggatctggtgggtcgttgcgtt
ttgcaagacatttgtgatcctaacacgggcgaagttttgtttgccaaagactcttacatc
tcttcaaagcaagacttgcaaaagcttgttgacgctggtcttaaaagcgttgtgcttcgt
gcgctgcttacctgtaagtctcgttatggtgtttgtcaaaagtgctatggttgggacttg
tctacgcgccgtcccgtaaacattggaacttcagttggtattattgctgctcagtccatt
ggtgagcctggtacccagcttacgatgcgcaccattcactctggtggtgttgcaggtgcc
gaggatattacgcaaggtttgcctacggttgctcgtatgttcgacgttgttggaaacgtt
aacgaaaagattttgggacgcgaagccgatcttgctgcgttcagcggtattttgcacatt
acacctgagcaaaccgagtaccaaattagcattaccgataaagacgacgaaagccgcatt
cttgcgcagtggcgtgttcctgcctctgttcgctttatgcctggtatcgaagatggttgc
gaagttgagcctggcgatcagattacccgcggctttgttaactttagagttttacgcagc
ttaactggtatcgaagaaaccatgcacacctttgttaagtcggttaaagacgtttatacc
tcacaaggtgtagaccttaacgacaaacacatcgaagttattgcacgtcagatgttgcgc
cgtgttcaaattaccaatccgggcgattcgcaatacctgcttggccagtatgttgataga
tacgtatttgccaatacggttgcaaacattagcgccgcaggtggtaaagttcccgaggca
gaagcggttattttgggtacgcttaaagttgcgtcctcaattgattcgtggctgtcaagc
gcatcgtttatccgtacagcaggtgtcttaaccgagtctgctattaagggcgaaaccgac
cacttacttgaccttaagtctaacgtaattgctggtaagaagattcctgcaggtactgga
cttaaagcgtatgatgatgttcagcttacgtataagggtcaagctatcgatgggcctacc
tctcctaatgcaaaggcgctccccgattgggcacctgatgagcttaaagatattgaagag
cagctccccaagcagcttgactggattggtgaggactactccaacaatggtgtttactct
aagaacggacgttcgctttctaccgaggacgctaagctctatctgtttgacgaccttggt
gtgtcacaacgctggacaaataaattcagcgaagttggtatagaaactgtgggcgatctt
attggtaagactgaggatgagctgctgcgtattgatggtattggcgcgaaggcaattgaa
gaacttcgcgagggtcttgaggcgcgtaacttgctatatatcttggagcccgatgaagac
gaagccgacagcgaagatctttcgcagctgttgaacatggtattctcgcccgatcctgat
aacgacattatgcttggaactgctgctcctgcaacgcatcactttactgaagatgagttt
attggtggtgcagattccgatgagcacgataacagcgaagatagcgatattatcaacgag
gatcttgattccttaggcgacttgctttcaagcgttatgaagcaagacagcgcggatagt
gataaacaagacgagtaa
DBGET
integrated database retrieval system
