Frieseomelitta varia: 122526940
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Entry
122526940 CDS
T09482
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
fvi
Frieseomelitta varia
Pathway
fvi03022
Basal transcription factors
fvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122526940
09124 Replication and repair
03420 Nucleotide excision repair
122526940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvi03021
]
122526940
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122526940
Transcription machinery [BR:
fvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122526940
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122526940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
122526940
NCBI-ProteinID:
XP_043506570
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGSSSIFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRM
LQENPVLLQLYRDLVITQVISSEEFWSQHAAEYTQAKKSQRQEIGVNSAFLADIKPQTDG
CNGLKYNLTVDIIECIFKTYPAVKRKHQENVPHKMSESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQSGIDDPLVDITSFEDQTLDENYGNGPTKSDKISGNIVHQSM
IKRFNQHSIMVLKASTVKQSTQSIQPQLNGSTPSASKTATLSNQLDERPKIKKLRIQEKL
IYDDLDATYDTNSNSSAPLNLNHVDRYLHGPVPGYSNTEPTSEELLITLNQLKKEASGWL
TGNSIPRQLATSLVSPAAAVSALGELTPGGSLMKGFREESLGQLIPKDLEKELRNVYVCT
CELLRHFWRSFPPTTPQLEEKAIRMHEALHRFHSAKLKPFEDRVQRDFSAVSQHLTSHLN
QLLNTAYRKFAVWQQRKMQMR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcatcggaagatgttctaatgcaagtaggacaagttcgttataaaaaggga
gatggtactttatatgtcatgaatgaaagaatagcctggatgcttgataacagagacact
gtatcagtcagtcataaatatgctgacattaagttacaaaagatatcaccagaaggaaaa
tcaaaaatacagttgcaagttgtactgcacgatggttcatcatctatatttcattttgta
aacagaaatgggcaagaggcacaaattaaagatcgtgatgatgtaaaagaattacttcaa
caattattaccaaaatttaaaagaaaagtaaataaagaattggaagaaaaaaatagaatg
cttcaagaaaatcctgtgctgcttcagttatacagagatttggttatcacccaagttatt
tcatctgaagaattttggtcacagcacgccgcagaatatacccaagctaagaaaagtcaa
agacaagaaataggagtaaatagtgcttttttggctgatataaaaccacaaaccgatggt
tgtaatggtttgaagtataatttaactgttgatattatagaatgtatatttaaaacttat
ccagcggtaaaaagaaaacatcaagagaatgtgcctcataaaatgtcagagtcagatttt
tggacaaagttctttcagtcacattattttcatcgagatcgtatcaatgcagggaccaag
gatctttttaccgaatgtgccaaaatagatgatcaagaacttaagaaagatattcagtcg
ggtattgatgatccattggtggatataacttcttttgaagatcaaaccctagatgaaaat
tatgggaatggacccactaaatctgataaaatttcgggaaatattgtacatcaaagtatg
attaagagatttaatcagcacagtatcatggttttaaaagctagtactgtcaagcaatct
acacagtccattcaaccacaattaaatggatcaacgccatcagcgagtaaaactgcaaca
ttgtctaatcagttagatgaacgaccaaagattaaaaagcttagaatacaagaaaaatta
atttatgatgatctcgatgccacttatgatacaaattcaaatagtagtgcgccgttaaat
ttgaatcatgtagacaggtacttacatggtccagtgccaggatatagtaatacggaacca
acatctgaagaactccttataacattaaatcaattaaaaaaagaagcaagtggttggcta
acgggaaatagtataccaagacaattagcaacatcattagttagtccggctgcagcagtt
tcggctctaggagaattaactccaggtggctctttaatgaaaggtttcagagaggaaagt
cttggacaattaataccaaaggatttagaaaaagaactacgtaatgtatatgtgtgtaca
tgtgaacttttaaggcatttttggagaagtttcccacctacaactccacagcttgaagaa
aaagctattagaatgcacgaggcgttacatagatttcattctgccaaacttaaacctttt
gaagatcgtgttcaacgagatttttctgctgttagtcaacatttgacaagtcatttaaat
caattattaaatacagcatatagaaaattcgcagtttggcaacaacgtaaaatgcaaatg
aggtag
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