Frieseomelitta varia: 122527084
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Entry
122527084 CDS
T09482
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fvi03009
]
122527084
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122527084
Ribosome biogenesis [BR:
fvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
122527084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122527084
NCBI-ProteinID:
XP_043506870
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKTQNWKELESPLSDSVLKTIEELNFPYMTPVQAASIPMLLNGKDVAAEAVTGSGKTIAF
LVPLLEILQKRNEKWKPTEIGAIIISPTRELAVQISEILQKFLNNIPSLKQVLLVGGTTI
AMDADKIQAGANIIVATPGRLEDMLCNCKCINLVACVKSLEILILDEADRLLDLGFSATL
DTILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPTLITVKEKPNISTPSNLKNNYVIVS
AEYKLSIMIDFIRHKGINLKYMIFLSTCACVDYFSHVIQTMLPSIQVFAIHGKMKSKRYK
VFNDFRSTESGILICTDVMARGIDILEMDWVLQYDPPCSASSFVHRCGRTARIGNEGNAL
LFLLETEDAYVDFIKKNQKVDLQQIVLEPSIISYENCLKCMRNLQKQDRFFFDKANRAFA
SYIQAYNKHECNLILRLKDIDLGKLAMGFGLLKMLRMPELKGKDTTNFVEEDIDINLLAY
SDKQKEKSRLEKLKIFQNTGVWPKTQKRKSKQTEPWSETKKRKIEKQENRKRRKEKKLKQ
KMSTDITKKQKRKINEQDMEDLAKDIALIKKLKKKKISQEEFDMAFGID
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcagaactggaaagaattagagtcgcctttaagtgactctgtattgaagacc
attgaagaattaaactttccttatatgacaccggtgcaggcagcttctataccaatgtta
ttaaacggaaaagatgttgctgcagaagcagtaacagggagtggaaaaacaattgctttt
ttagttccattattagaaatcttacagaaaaggaatgaaaagtggaaacctacagaaatt
ggggcaataataattagccctacaagagagctggctgttcaaataagtgaaattttgcaa
aagtttctgaacaatataccaagtttgaaacaagtattacttgttggtggtacaacgatt
gcaatggacgcagacaaaattcaagcaggagcaaatattattgtagcaacacctggtaga
ttagaagatatgttgtgtaactgtaaatgtataaacttggtagcatgtgtaaaatctttg
gaaatactgatcttagatgaagctgatagactattagatctaggtttttctgcaacgcta
gatacaatattatcttatttgccacgtctcagaagaacaggtttattctctgcaactcaa
acaaaggaattacaacagttaataagagctgggcttagaaatccgactctgataactgtt
aaagagaaaccaaatatttctacaccatcaaacttaaaaaataattacgtgattgtgagt
gccgagtacaaattatctataatgattgattttattcggcataaaggcattaatttaaaa
tatatgatctttttatctacttgcgcatgtgttgattactttagtcatgttatacaaact
atgttgccatctattcaagtatttgcaattcacgggaaaatgaaaagcaagcggtataaa
gtatttaacgactttcgatctactgaaagtgggattttaatttgtacagatgtaatggct
cgtggtattgatattttagaaatggattgggtattacagtatgatcccccctgttcagct
agtagttttgttcatagatgtggcagaactgctagaataggtaatgaaggaaatgcgttg
ttattcctcttagaaacagaagatgcatatgtagattttattaaaaagaatcaaaaagta
gatttacaacaaatagttttggaaccatccataatttcgtatgagaactgtttaaaatgt
atgagaaatttacaaaaacaagatcgatttttttttgacaaggctaacagagcgtttgca
tcatacatccaagcatataataaacacgagtgtaatttaatattaagactaaaagatatt
gatttaggaaaacttgcaatgggttttggtttattgaaaatgcttcgtatgccagagctt
aaaggaaaagatacaacgaattttgtggaagaagatattgatatcaatttacttgcgtat
tcagataaacaaaaagaaaagagtcgtttagaaaagttgaaaattttccaaaatactgga
gtatggcctaaaacacaaaaacgtaaatccaagcaaactgaaccttggtctgaaactaag
aaaagaaaaatagaaaaacaggaaaatcgcaaaagaagaaaagaaaaaaaattaaaacaa
aaaatgtctacagacataacaaaaaaacaaaaaaggaaaataaatgaacaggatatggaa
gatctagccaaagacatagcgttaattaaaaaattaaagaaaaaaaagatatctcaagaa
gaatttgatatggcttttggaattgattaa
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