Frieseomelitta varia: 122527439
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Entry
122527439 CDS
T09482
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122527439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvi03041
]
122527439
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122527439
Spliceosome [BR:
fvi03041
]
Complex A
U2 snRNP components
U2 related factors
122527439
Complex B
122527439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
122527439
NCBI-ProteinID:
XP_043507576
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSATPEKKRRRSRSRDRDRERDKGRHRERRSRSRDRDRD
RRDRSERDRDRDRKRGDSKEKRLTGSKSSRSGKDRSNRSRSRDRKEKEKGDNDELPFDHT
KLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKASILANLQLPMKKWSLED
DSDEETPVIQNCNKECKEDGETKEEMEEVKEETKCDEEEVDPLDAFMAEVQEEVRKVNKL
DNKGGKNANNGTGAGGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSATNIAVPGQP
VPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDAEAGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagtagcgacaaagataggcatcacagaaggcggtctagatcgcgttctaga
tcacggtctgctactccggagaagaaacgacggcgatctcgaagtagagatagggacaga
gaacgagataaaggacgacacagggaaagaagaagtcgttctagagatcgtgacagggac
agaagagatcgttctgaaagggacagggatcgtgacaggaaacgtggagacagtaaagaa
aagcgtcttacaggctcaaagtcttcgcgttcaggcaaagatcggtcgaatagatcaaga
tcaagagaccgaaaggagaaagagaagggtgacaatgatgaattgccgtttgaccatact
aaattagacaaggaggaagagcaaaaaagattggaattagaaatgcaaaagaggagagaa
agaatagagagatggcgtgcagaaaggaaaaagaaagaattagaagcaactaagaaagac
ggtaaggcatctattttagcaaatctacagttgcctatgaaaaaatggtccctcgaggat
gacagcgatgaagagacgcctgttatccaaaattgcaacaaggaatgcaaagaagatgga
gaaacgaaagaagaaatggaagaagttaaggaagaaaccaaatgcgatgaagaagaagtt
gatcccctcgatgcgtttatggcagaggttcaagaagaagttcgtaaagtgaacaaactc
gataataagggtggaaagaacgcgaataacggcacaggtgccggaggtactcagagcggt
ggtgttgttatcgtcactggcgtagccaaaaagaaagtgcagaagcaaaaaggggaatta
attgagcagaatcaagatggtcttgaatattctagcgaagaagaaggcgagaatcttcac
gaaaccgccgctggcatcgcgaataagcagaagcgagaattagccaaagtcgatcacgca
acgacagaatatcagccattcagaaaatcattttacgttgaagtacctgagattgcgaga
atgacaccagaagaagtagaagcgtacaaagaagaattagaaggtatccgtgtgaaaggc
aaaggttgcccgaagcctattaagtcgtgggcacaatgtggtgtcacgaaaaaggaattg
gaggtactaaagaaactcggttatgagaagccaactcctattcaatgtcaagccattcca
gcaattatgtctggccgtgatttgataggtatagcaaagacaggcagtggaaaaacgtta
gccttcttgctaccaatgtttaggcatattcttgatcagcctccactggcagatggtgat
ggcccaatcgcattaatcatgacaccaactagagaattatgtatgcaaattggaagagat
tcgaagaaattcacaaagtctctgggattgtcccacgtttgcgtttatggcggaactggt
atatcggaacaaatagctgagttaaagagaggtgctgagataattgtatgtacgccaggc
agaatgattgatatgttagctgccaacagtggaagggtaacaaatctacgcagagtgaca
tacgtagttcttgacgaagcggatagaatgtttgacatgggtttcgagcctcaagtgatg
cgtattatggaaaatgttcgaccagaccgacaaactgtattatttagcgcgacattccct
cgacaaatggaagctttagcaagaagaattttaaccagacctgtggaagttcaggttggt
ggacgatctattgtttgtaaggatgtggaacaacacgtggtggttcttgaagaagatcaa
aaattttacaagttacttgaaattcttggccactatcaagataagggttccactataata
ttcgtcgacaagcaagaaaacgcagatactttattgaaggatctcatgaaagcttcgtat
tcctgcatgtcacttcatggaggtatcgatcaatgcgatagagattcaacgatattagat
ttcaaggctggcaggacgaagttattggttgcaacgtcagtcgcagccagaggtctggac
gtgaagcatcttgtacttgtagtaaattacgattgcccgaatcattatgaggattacgtg
cacagatgtggaagaacaggaagagctggaaataaggggtatgcatatactttcatcaca
tcagaacaggaacggtacgcaggtgatattttacgcgctcatgaattagccggagtccct
gttcctgaaccattgcgacagctttgggaaggatataaagctcgacaagcagcagatggc
aagaaagttcacaccggcggtggtttcagtggcaaaggattcaagtttgatgaatcagaa
gcagccttagcaaacgaaaagaagaaattccagaaggcagctctgggattacaagactcc
gatgacgaggatatagagaacgatattgaccaacaaatagagagtatgcttgctccaaag
aggacggttcgcgaaattgctagaccttctgccactaacattgcggttcctggacagcct
gtacctagtgcaactgacaagttagaattggctaggcgattagcatctaagatcaacata
gcgaagaatttgggtgctgaggcaaagggtgcaacacaacaagcggctgaagctatactt
aaaggtgctggtcctactaatcttattacagcaaaaacagttgcagaacagttggctgca
aaattgaataccaagcttaattaccaacctcgcgaagaagatcttgtggaaagtgacgca
gaggctggcgaacaaaccttccgtaaatacgaagaggaattggagatcaacgactttccg
caacaggctcggtggcgggttactagcaaagaagctcttgctcagatctcagagtattct
gaggcgggtcttacagttagaggaacttacattgcacctggtaaagcaccacctgaagga
gaaaggaagttgtatcttgctatcgagtctacaagtgaattggcagttagcaaggccaaa
gcggaagtatcacgattgattaaggaagaactgatcaaattgcaagcgtccggagcacac
actgcatctcgtggtcgatacaaggttttataa
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integrated database retrieval system
