Frieseomelitta varia: 122527723
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Entry
122527723 CDS
T09482
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122527723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122527723
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122527723
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122527723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
FapA
TUTase
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
122527723
NCBI-ProteinID:
XP_043508094
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MSKDKDIIVCVPGQRLCVSDKFNIAGPGTYEQQGYIYSKLAGVIKLIQKENTRTIEVHGI
TEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDKDNIQM
YKSFRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEGVAMIPINWTQMQCPKTLR
KEFRKVAKVVPEHVIAEQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagataaagacattattgtatgtgtgccagggcagaggttatgcgtatccgat
aaattcaatattgctggaccaggaacttacgaacaacaaggttatatctattcgaaatta
gctggtgtgataaagttgatacaaaaagaaaatactcgtactatagaagtccatggaata
acagaacaaagtattgtacctgcgcctggtgacattgttacagccatggttaccattgtc
aatcaaagattttgtaaatgtagtataaaatgtataggtgatattgtattgacaagacct
tacagaggaattttaaggaaagaagatgttcgcgcaatagataaagacaatattcaaatg
tacaaaagttttagacctggggatattattcttgcaagagttatgccaatgacagaagca
catacttatcaattaagtacagcagaaaatgaattaggagtagtgatagcacatagtgaa
gaaggtgtagctatgatacctattaattggacacaaatgcaatgtcccaaaacattacga
aaagaattcagaaaagtagcaaaagtagtaccagaacatgttattgcagaacaataa
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