Frieseomelitta varia: 122527728
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Entry
122527728 CDS
T09482
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122527728
09123 Folding, sorting and degradation
03018 RNA degradation
122527728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122527728
03041 Spliceosome [BR:
fvi03041
]
122527728
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122527728
mRNA degradation factors
5'-3' decay
Lsm complex
122527728
Spliceosome [BR:
fvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122527728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
122527728
NCBI-ProteinID:
XP_043508103
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLH
IIRGDNVAIVGELDDEMDARLDLSAIRADPLSSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggtttggaaagttatgtaaatcatactgtttccataatcacttcagatggt
agaaatttcatcggaacgttgaagggttttgaccaaacaattaatataatattagacgag
tctcatgaacgtgtgtatagtacaactcaaggtgtagagcaagtagtattaggtttacat
attatcagaggtgataatgtggcaattgtaggagaattggatgacgagatggatgcacgt
ttagatctatcagctataagagctgatcctttaagttctattgtacattga
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integrated database retrieval system
