Frieseomelitta varia: 122528286
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Entry
122528286 CDS
T09482
Name
(RefSeq) Fanconi anemia group J protein-like
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03440
Homologous recombination
fvi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122528286
03460 Fanconi anemia pathway
122528286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122528286
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122528286
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122528286
FA (Fanconi anemia) pathway
Downstream FA components
122528286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
AAA_14
Motif
Other DBs
NCBI-GeneID:
122528286
NCBI-ProteinID:
XP_043509192
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MSVGRFIHEDSSLDDEPTTSGENNGEDSNKKCVDDDHTSHNDDNSENIFDEKKLKKLKVS
KIYYGTRTHKQIEQVVRELRKTSYRHKKMAILSSREQTCIQQSTKNKTELCNELLDPIKH
KGCPFYNESNKKKISTFQAVENRGLSSIWDIEDLVTIGKNEESCPYFAARSLASQADIIF
CPYNYIIDPDIRESMQLDLKDQVIILDEAHNIEDICREVASVSFREDHLQVVLKECESLG
KARVSDVNPGAYHVLSMFVSRVLQLLGSVDLNKSNYNNEIRSSPYWTGHELTVLFDIYYI
SKPLCISFIQACYTAIADMNKAKEQSKMSHKFTKPVISPATKSVLDHLMFAVRMIFTNHA
YDYTACVTEAIVNDLKTPTGRLFNRVSNDWFPAKHRKQHARTLKLMCMNPGVIFTPLAQN
ARSIILASGTLSPTATFESELGTSFPHVLKTSHVIPKEQVYATCIPHGPQVVPLRGTFSS
VNSWSFQDEVGRVMLDICESMPHGILCFFSSYNVMHKHIERWKTTFTLSKISNVKHVFIE
PRNGGDLAGIMFEYRQVIEQTSAKQVKNVTGALLLAVFRGKVAEGIDFKDDEARCVVTVG
IPYPVRNDPMVDMKMAYNDKKVKNGLLRGSDWYSTQAFRALNQALGRCLRHIHDWGALLL
IDERFLQDENKENLPKWVKTMWVNPEKYTLKKDLQHFVARQKMRDAKQSEISN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgggccgattcatccacgaggattcctcgcttgacgacgagccaacgacatcg
ggcgagaacaatggagaagattcaaataaaaaatgcgtagatgatgatcacacatcgcac
aatgatgacaacagcgagaacattttcgacgagaagaaactaaagaagttgaaagtctcg
aagatatattacggtacgcgaacgcacaagcaaatcgagcaggttgtgagggaattgagg
aagacttcgtacagacacaagaaaatggccattttgagcagcagagagcagacatgtatc
caacagtccacgaagaataaaaccgagctttgcaacgagttgttggatcctataaagcac
aaagggtgtccattttacaacgagtccaacaagaagaagatttccacgtttcaagccgtg
gagaatcgaggtttgtcttcgatatgggacatcgaggacttggtaaccattggaaagaac
gaagaatcatgtccgtatttcgctgccagaagtctcgcgagccaagcagacattattttc
tgcccttacaactatatcatcgaccctgatatccgcgaaagtatgcaactggatctgaag
gaccaagtaattattctggacgaagctcacaacatagaggatatttgtagagaggttgca
agcgttagtttccgcgaggatcatcttcaagttgtcctaaaagaatgcgaaagtctcgga
aaagcaagagtaagcgatgtaaatcccggggcttaccatgttctgtccatgttcgtttcc
agggtgttacagttgctgggcagcgtggacctcaataagagcaactataacaacgagatt
cgttcgagtccgtactggaccggccatgaactgacagtattgttcgacatttactatata
agcaaacccctatgtatatcgtttatacaagcttgctacacagcgattgcagacatgaat
aaagcgaaagaacagagcaaaatgtctcataaattcacaaagcccgtcatttcacctgcc
accaagagtgtacttgatcatctgatgttcgccgttcggatgattttcaccaaccacgcg
tacgattacacggcgtgtgtgaccgaagcgatagtaaatgatttaaaaactccgactgga
aggttattcaaccgggtttctaatgactggtttccggcaaaacatcgtaaacagcatgca
cgaaccttgaaactaatgtgcatgaatccaggcgttatctttacaccgctcgctcaaaac
gcgcgctctataatactcgcgtctggtactctgagtccaaccgcgacatttgaaagtgaa
ttgggaacgtcgttcccacacgtgctgaagactagtcatgtcatacctaaggagcaagtt
tacgcgacctgtataccccacggacctcaagtggttcccctcagggggactttttcatct
gtgaacagctggtctttccaggatgaagtaggtagagtgatgttagatatttgcgaatca
atgcctcacggaatcctctgcttcttctcctcttataacgtgatgcacaaacatatagaa
agatggaagaccactttcactttgagtaaaatctccaatgtaaagcacgtgttcatagaa
cctcgcaatggaggtgaccttgcgggaattatgttcgaatatcgtcaagtgatagagcag
acatctgctaaacaagtgaaaaacgttactggagcgctattactggcagtcttcagagga
aaagtagcagaaggaattgactttaaagacgatgaagctcgttgtgtagtcactgttggt
ataccttatccagtaaggaacgatcctatggttgatatgaaaatggcttataacgacaag
aaggttaagaatggcttgttaagaggatcggactggtattccactcaggcgttcagggcg
ttgaaccaagcattgggtcgttgtttgagacatatccatgattggggggctctgttgcta
atcgacgaaagatttttgcaggatgaaaacaaggaaaatttgccaaaatgggttaaaaca
atgtgggttaatccagaaaagtacaccttgaaaaaagaccttcaacattttgtggcaaga
cagaaaatgagagatgcaaaacagtcagaaatctcaaattaa
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