Frieseomelitta varia: 122528567
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Entry
122528567 CDS
T09482
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fvi03016
]
122528567
Enzymes [BR:
fvi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
122528567
Transfer RNA biogenesis [BR:
fvi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
122528567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
YqgF
Motif
Other DBs
NCBI-GeneID:
122528567
NCBI-ProteinID:
XP_043509778
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MIDLILSRNNVFIWNAEDWLKLRKDYRIIGELIGCLPKKPRQDIFLGLPLLLQPEEVSLL
LEKGIARLVQYSCLQKLPSDSLKQAFEEYRNTLYIEQEKCLRKERQKQVIGMMDKIIEGK
KRKMLGIDTKNKKAMKSLDPKVQTSFDNIEINKQELLEEEMAKLPKLDKNEALIQIHTVY
PWTSKDDIEIVEWKYPYTEKQQLRYKTFKDLWEKGYYLTNGEKFGGDFLAYPGDPIMFHS
QFIILCKDKKEEIPITEFSAQCRIACHVRKTQVYAFFSENQDIKYQSFQWAESAVLENI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatagacttaattttatcaagaaataatgtctttatatggaatgcagaagattggctg
aaacttagaaaagattatcgaataattggtgaactcataggttgtcttccaaagaaaccc
agacaagacatatttttaggtcttccattactattgcaaccagaagaagtatctctttta
cttgaaaaaggtattgcacgacttgtacaatattcatgtcttcaaaaattaccatctgat
tctttgaaacaagcttttgaagaatacagaaatacattgtatatagaacaagaaaaatgt
ttaagaaaggaaagacaaaaacaggtaattggtatgatggataaaattatagaaggaaaa
aaacgaaaaatgcttggaatagatacaaagaacaaaaaagcaatgaaatcattagatcca
aaagtacaaacatcatttgataatattgaaataaataaacaagagttactagaggaagaa
atggcaaaattacccaaattggacaaaaatgaagctttgattcaaatccatacagtgtat
ccatggacaagtaaagatgatatagaaatagtggaatggaagtatccttacactgaaaaa
caacaacttcgatataaaacatttaaagatttatgggaaaaaggatactatttaacaaat
ggagaaaaatttggtggagattttttagcatatcctggagatcccattatgtttcattct
caatttataattttatgtaaagataaaaaagaagaaattccaataactgaattttcagcg
cagtgtcgaattgcttgccatgttcgaaagacacaagtatacgctttcttttctgaaaat
caagatataaaataccaatcattccagtgggcagaaagtgctgtacttgaaaatatttaa
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