Frieseomelitta varia: 122528791
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Entry
122528791 CDS
T09482
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fvi03016
]
122528791
Enzymes [BR:
fvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
122528791
Transfer RNA biogenesis [BR:
fvi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122528791
Prokaryotic type
122528791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H
TMPIT
Motif
Other DBs
NCBI-GeneID:
122528791
NCBI-ProteinID:
XP_043510231
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MSKASKNIESEKHRKDSRKNNRWGKKKNNGSRNDNFKKSSFKRNLPNFHSDEKRKKLQVG
NRLKECDVGITEFIGSEGFFGVIKERYSDFQVNEIAADGQIAKLTNQDVPSDGEDESTED
PQKMIPSAIWSQLQEFKKLKNASLEIDVTNLSKDQRKAIHSIAKSMKEVLSQTVDRENKK
ILMILPNKYGNNKNFRKDTRINWKNQGKYCYFLLHKVNMDTMAALNRLAMNLRLNPNSFS
YAGTKDRRAWTTQWVSVKKIRPTNILRAAKNIRGAYIGNFKFEMECLKLGMLNGNCFRIA
LRNVSGTDEQIEKSMISLREHGFINYYGMQRFGTVATIPTYEIGKALLQGKWNEAIDLIL
KPREGENDEDVVEARKIYAETKDASAAYKRIKNCNKVEAILLKGLSTCNSNNPQGALDLI
PRNVRLIYIHAYQSFVWNHIVSKRIREFGKNPVVGDLVYEKDVKSDNEEELVTEDEEANE
KVSELGNEEDVDEEMEKPPETFEESPNTLIKEMTDTTECCLKVDEKYRKNTEKSRITNEK
NENNDSYNLPAVKILEEKDLPNYTLADVLMPQVGWKVTYPPYAKPWFDEFLAKDGLTTDL
RQKNKKYTLGGAYRKILQIPSNLSWNVMHYSKKHADLIMCDINEMRKCSAPKDDPEGKYK
ALIIQMSLKSSTYATMALREILKSDTSPQVQAAQSAACEAEFEKSNISEKTKNTIKDDNK
SSDMKKHFDIEDDKMEISN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagcaagtaaaaatattgagtccgaaaaacatagaaaagattccaggaaaaat
aatcgatggggcaaaaaaaagaacaatggatctcgaaatgacaattttaaaaagagttct
tttaaacgaaatttgccaaattttcactcagatgagaaaagaaagaaactgcaagttgga
aacaggttaaaggaatgtgatgttgggatcacagagtttattggaagcgaaggatttttt
ggtgtgattaaagaaagatattcagactttcaagttaatgagattgctgctgatggacag
atagctaaattaacaaatcaagatgttccatcagacggggaggatgagagcacagaagac
ccccaaaaaatgataccaagtgcaatttggagtcaactgcaggaatttaaaaaattaaaa
aatgctagtctagaaattgatgtaacaaacttgtctaaagatcaacgtaaagcaattcat
agtattgctaaatcaatgaaggaagttttaagtcaaactgtagatagggaaaataagaag
atcctgatgattttgccaaataaatacggtaataataagaactttcggaaagacactagg
ataaattggaaaaaccaaggaaaatattgttactttttattacataaagtgaacatggat
acaatggctgctttgaatcgactagccatgaatttacgtttgaatccaaatagtttcagt
tatgctgggacaaaggatcgtagagcgtggactactcagtgggttagtgtaaagaaaatt
cgacccacgaatatattaagagcagcgaaaaatatacgtggagcgtatataggaaatttt
aaatttgaaatggaatgtttgaaattaggcatgttgaatggtaactgctttagaatcgct
ttgagaaatgttagtggaacagatgagcaaattgaaaagtcaatgatttctttaagagag
catggatttataaattattacggtatgcaaagatttggtactgtagcaactattccaact
tatgaaataggcaaagctttacttcaaggtaaatggaacgaggcaattgatttaattttg
aaacctagagagggtgagaatgatgaagacgtggtagaagctagaaaaatatatgcagaa
actaaagacgcaagcgctgcatacaaaagaattaaaaactgtaataaagtagaggctata
cttctaaagggactcagtacatgtaatagtaataatcctcaaggtgctttggatttaata
ccaagaaatgttcgtttaatctatattcatgcctatcaaagtttcgtttggaatcacata
gtatcaaaaagaataagagaatttggaaagaatcctgtggtaggagatctagtatatgaa
aaagatgtaaaatctgataatgaagaagaactcgtaactgaagatgaagaagctaatgaa
aaagtaagtgaacttggaaacgaagaagatgtagatgaggaaatggagaaaccgcctgaa
acattcgaagaatcaccaaatactttgattaaagaaatgacagatactacagaatgctgc
cttaaagtagacgagaaatatagaaagaatacagagaaaagtagaattactaatgagaaa
aatgaaaacaacgattcatataatcttcctgcggtaaaaattcttgaagagaaagatttg
ccaaattacactttagcagatgtattaatgccacaagttggttggaaagttacatacccg
ccctatgctaaaccatggttcgacgagtttctggcaaaagacggattaactactgatctt
aggcaaaagaataaaaaatatactttgggcggtgcttatagaaaaatattgcaaattcct
tcgaatttatcttggaacgttatgcattattcaaagaaacatgccgatcttattatgtgc
gatattaatgaaatgagaaagtgctcagctccaaaagatgatccagaaggaaaatataaa
gctttaataatacaaatgtctttaaaatcttctacatatgcaactatggcattgcgtgaa
attttaaaatctgatacatcgccgcaagtacaagctgctcagtctgctgcttgtgaggca
gaattcgagaagtcaaacatctcggaaaaaactaaaaacactatcaaagacgataataaa
tcgagcgatatgaaaaaacattttgatattgaagatgataaaatggaaatatccaactaa
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