Frieseomelitta varia: 122528912
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Entry
122528912 CDS
T09482
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvi03021
]
122528912
03036 Chromosome and associated proteins [BR:
fvi03036
]
122528912
Transcription machinery [BR:
fvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122528912
Chromosome and associated proteins [BR:
fvi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122528912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
HHH_3
S1
HHH_9
Tex_YqgF
Tex_central_region
Spt6_S1
S1_RRP5
OB_RRP5_4th
Tex_N
CTD9
Motif
Other DBs
NCBI-GeneID:
122528912
NCBI-ProteinID:
XP_043510474
LinkDB
All DBs
Position
Unknown
AA seq
1732 aa
AA seq
DB search
MADYLDAEAEESEEEEELDVNEKKKLKKLRMKDSDDDEEYDEEEEGEVSGLIDDNPIDDD
NDEDSEDSDDSRKRKKSDDEDFDDRLEDEDYDLLEENLGVKVERKRRFKRLRRVQDEDSE
EEKGEVDDERDAIANELFQSSGEEDEERNEVGLRGETEDFDEEESEDEDDFIVDGDGIPI
TEKRKKKKPIFSDAALQEAQDIFGIDFDYDEFGKYEENEFKEEEEEEEEDEDEYIQDEID
CRKRLKKNFKKRSIRKSIFELYEPSELIRGHFTDVDNEIRTTDIPERMQIRAVPVTPTAE
GSDELDLEADWIYKQAFCQPTISIQDAYLNEEAKERTKKGPQTVGKIKKVLDFIRNQNFE
VPFISFYRKEYVSPELNINDLWKIYKFDVKWYQLKQRKENLLKLFERMRNFQLNEIMKNP
NAPLLDNIRVIKDDDIERLKNIQTFEELNVIYQHFMLYYNQSLSAMQKDTRKKEKELRKK
AKLEKRKQFVEAEENEEDPAKEISDVDDEEEEIDDSLKQPVRKGPYYLCKKAGLDGLAKK
FGLSPEHFAENLRDNYQRHEIDQEPTEPAVVANDFCSVLFKTSDEILKAAQLMVAIQLAY
EPLVRKCIREMYMERAKISVKPTKNGMKEIDEGHAIYSLKYLKNKPVRDFVGDQFLKLII
AEEDKLITLLFSDMIEGNISNNYMDEIKQLYYKDEFSKSVQDWNALRIGSVEIAFNQIII
PQLKKELRSNLLAEAKEYVMKACCRKMYNWIKIAPYTCEFPNENDEDWDTNKGIRVMGLA
YVPDPFQVAFTCIISPEGECTDYLKLPHLLKRKNNFRENEKRLKEADLLAIKNFIATKKP
HVVVVGGESREALTIVSEIKECISNLAEQEEFPEIQVEICDNELAKVYANSNRGISEFRD
YPELLRQAISLARKIQDPLLEFSQLCTIDEEILCLKYHPLQDQLSKDDLIENLYLEFINR
VNEVGVDLNRAIQQPYTANLVQFVCGLGPRKGQALIKILKQTNQRLENRTQLITACHMGP
KVFVNCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPAG
ALEEILESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKDLRIPYQSPNTE
KLFDILTKETPETFYIGKLILATVVGVSHKKPQGDQLDQANPVRNDETGLWQCPLCLKND
FPELSEVWNHFDTGACPGKGVSVLRLDNGVSGYIHIKNLSDKNVVNPEERVRVGQAIHCR
IIKIKVERFSVECTSKTSDLIDKSHKWRPQRDVYYDLEAEEQDIKAEEDAKKLQQRRTYV
KRIIIHPNFHNISFIEAEKLMQTMKQGEAIIRPSSKGADHLTVTWKITNNIYQHIDVKEE
GKENTFTLGRSLWIGDEEFEDLDEIIARHVNPMAAYVLELLDFKYYKPSVEGIKDKAEEI
LKEQKKKNPGEIPYIVSASKNYPGKFLLSYLPRNNCRHEYVTVIPDGFRFRNQMFNRISD
LFRWFKEHFRDAIPIKLGTPHGTMTSKTLYNGTSGINEVNPDTIQRVAQNMPHHMLHSLS
KVANQTSHHYPSYTPGVVSINNYEMYENTPYTPSGQTPFMTPYHTPHYLQTPNYSQGPFL
QPIPPVMNSNSRRIASSHTSISNASDTTNWTKAAEAWTRSKQSTLREFNTTPRFDESKKT
SRNQENETATPRNRTTSAHTPSYKSPRGTPFINSSPQSMSLSGDLTPLCDES
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggctgattatttagatgccgaagcagaagaaagtgaggaggaagaagaacttgatgtt
aacgaaaagaaaaaacttaaaaaattaaggatgaaagacagtgacgacgacgaagagtat
gatgaagaagaggaaggagaagtttcgggacttattgatgataatccaatcgatgatgac
aatgatgaagacagtgaagactctgatgattctagaaaacgtaaaaaaagtgatgatgaa
gattttgatgaccgtttagaagatgaagattatgatctacttgaagaaaatttaggagtt
aaagttgaaaggaaacgtcgttttaagcgtttacgtagggtacaagatgaagactcagaa
gaagagaaaggagaggtagatgatgaaagagatgctattgctaatgaattgtttcaaagt
tctggagaggaagatgaggaaagaaatgaagttggtctaaggggtgaaacggaagacttt
gatgaagaagaaagtgaggatgaagatgatttcattgtggatggtgatggaatacccata
actgaaaaaagaaaaaagaaaaaacctatattctcagatgctgctttgcaagaagcccaa
gatatttttggtattgattttgattacgatgaattcgggaaatatgaagagaatgagttc
aaagaagaggaagaagaagaagaagaagatgaagatgaatatattcaggatgaaatagac
tgtcgaaaacggttgaaaaaaaattttaagaaaagaagcataaggaaaagtatctttgaa
ctgtacgaacctagtgaacttatacgtggtcatttcaccgatgtggataatgagattcgt
actacagatattcctgaacgcatgcaaattcgcgctgttcccgttacacctacagcggaa
ggttcggatgaattagatcttgaagcagactggatatataaacaagcattctgtcaacca
actatttcaatacaagatgcctatctaaatgaagaagctaaggaaagaactaaaaagggg
ccgcaaacagtcggcaaaattaaaaaagttttagattttatacgtaatcaaaacttcgaa
gttccatttatttcattttatagaaaagaatatgtttctccagaattaaatattaatgat
ttatggaaaatttataaattcgatgtaaaatggtatcaattaaaacaaagaaaagaaaat
ttattgaaattatttgaaaggatgagaaattttcaattaaatgaaattatgaaaaatcca
aatgctccattacttgacaatatacgagtcattaaagacgacgatattgaacgacttaaa
aatattcaaacttttgaagagttaaatgttatttatcagcattttatgttgtattacaat
cagagtttatcagccatgcaaaaagacacacgtaagaaggaaaaagaactacgaaaaaaa
gctaaattagagaaaagaaaacaatttgtagaagctgaagaaaatgaagaagatcctgct
aaagaaatttcggatgtagatgacgaagaagaagaaattgatgactcattgaagcagcca
gttagaaaaggtccttattacctttgcaaaaaagctggcttagatggacttgccaaaaaa
tttggtctttctccagaacatttcgctgaaaatcttagagataattatcaacgtcatgaa
atagatcaagagccaacagaacctgcagtagtagcaaatgatttttgttcagtattattt
aagacaagtgacgaaatacttaaagctgcacaattaatggttgcaattcaattagcatac
gaaccactagttcgtaaatgtattagagaaatgtatatggagagagcaaaaatatctgta
aaaccgaccaaaaatggaatgaaggagatagatgagggacatgccatttatagcttaaaa
tatcttaaaaataaacctgtacgggattttgtcggtgatcaatttttaaaactaattata
gcggaagaagataaactaattacacttttatttagtgatatgatagaaggaaatattagc
aataattatatggatgaaataaagcaattgtattataaggacgaatttagcaaaagtgtt
caggattggaatgcattaagaattggtagtgttgaaatagcttttaatcagattattata
cctcaactgaaaaaggagttgcggtctaatcttttagcagaagcaaaagaatatgttatg
aaagcatgttgtcgtaaaatgtacaactggataaaaattgcaccatatacatgcgaattt
cctaatgaaaacgatgaagattgggatactaacaaaggaattcgcgtgatgggtttagct
tatgtacctgatccatttcaagtcgcttttacttgcataatttctccagaaggagaatgt
actgattatttaaaattaccgcatttattaaaacgtaaaaataattttagagaaaatgaa
aagaggctgaaagaagcggatttattagcaattaaaaattttattgctacgaaaaaacca
catgtcgtagttgtaggtggcgaatctagggaagcattaacgatagtatctgaaataaag
gaatgtatatctaatcttgcagagcaagaagaatttcctgaaattcaagtggaaatatgt
gataatgaacttgctaaagtttatgcaaatagtaatagaggtatatctgaatttagagat
tatccagaattattaagacaagctatatctttagcaagaaaaatacaagatcctctatta
gaattctctcagttatgtactatagatgaagaaattttgtgccttaaatatcatccttta
caagatcaactttctaaagatgatcttatagaaaatttatatttagaatttataaatcgc
gtaaatgaagtaggtgttgatctaaacagagcaattcaacagccttatacagcaaattta
gtacaatttgtatgtggtttaggacccagaaaaggacaagccctcattaagattttgaag
caaactaatcaaagactagaaaatagaacacaacttataacagcatgtcatatggggcct
aaagtatttgtcaactgtgctggttttattaagattgatacaaatagtttaggagatagc
acagaggcatatgtagaagtattggatggatcgcgtgtacatccagaaacatatgaatgg
gcaagaaaaatggcagtagatgctttagaatatgatgacgaggatgcaaatcctgctggt
gctctagaagaaattctggaatctccagaaaggttaaaagatttagatttagatgcgttt
gcagaggaacttgaaagacagggttttgggaacaagtgcattactctttatgatataaga
gctgaattaaactgtagatacaaagatcttcgtataccttatcaatctccaaatactgaa
aagttatttgatattttgactaaagaaactccagaaacattttatattggtaaattaatt
ctagcaacagttgttggtgtaagtcacaaaaaacctcaaggagatcaattagatcaagcg
aatcctgtacgaaacgatgagactggattatggcaatgtccactctgtttaaaaaacgat
tttcctgaactatcggaagtgtggaatcattttgataccggtgcatgcccgggaaaagga
gtctccgttttaagattggataacggagtatctggttatattcacataaaaaatctatct
gataaaaatgtcgtcaatccagaggaaagagtacgtgtcggccaagcaattcattgtcgc
ataattaagatcaaagtagaacgatttagtgtcgaatgtactagcaagacgagcgatcta
attgataaaagtcacaaatggcgacctcagcgagatgtttattatgatttggaggcagaa
gagcaagatataaaagcagaagaagatgctaaaaaattgcaacaaaggcgaacttacgta
aaacgtattataattcaccctaatttccataatataagttttatagaagctgagaagtta
atgcagactatgaagcaaggagaagcaataatacgacctagcagtaaaggagcagatcat
ttaaccgtgacatggaaaattacaaataatatttatcaacatatcgatgtaaaagaggaa
ggcaaagaaaatacatttactttgggccgcagtttatggattggcgatgaagaattcgaa
gacttagatgaaattatcgctagacacgttaatcctatggctgcttatgtcttggaatta
ttagattttaaatattataaaccaagtgtagaaggcattaaggacaaagcagaagaaatt
ttaaaggaacaaaagaagaaaaatcctggtgaaattccatacattgtgtctgcaagtaaa
aattatcctggaaaatttttactttcatatttaccacgaaataattgtcgtcatgagtat
gttactgtaatacctgatggattccgattcagaaatcaaatgtttaatagaataagcgat
ttgttccgctggtttaaggaacattttagagatgctataccaattaaactaggtacccca
catggaactatgacttctaaaacactatacaatggtacttcaggaataaatgaagtaaat
ccagataccatacaaagagtagcacaaaatatgccacaccacatgctacattcactttcg
aaagtagcaaatcaaacttcacatcattatccatcatacacgccaggagttgttagtatc
aataactatgaaatgtatgaaaatacgccttatactccttctggtcaaactccgtttatg
actccataccatacaccacactatttacaaacacctaattattctcaaggaccattctta
caaccaattcctccagtaatgaattcaaattcacgtagaattgcaagctcacacacatct
atttctaatgcttctgatacaacaaactggacaaaagctgcagaagcatggactcgatcg
aagcagtctactttgagagaatttaatactactccaagatttgatgaatctaaaaaaaca
tcacgaaatcaagaaaatgagacagcaactccacgcaatagaacgacatctgctcatact
ccgtcttataaatctcctagaggaactccatttataaattctagtccccagagtatgtct
ctaagtggagatcttactcctttatgtgatgaaagttaa
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integrated database retrieval system
