Frieseomelitta varia: 122528953
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Entry
122528953 CDS
T09482
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122528953
04121 Ubiquitin system [BR:
fvi04121
]
122528953
Enzymes [BR:
fvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122528953
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122528953
Ubiquitin system [BR:
fvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122528953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
SGL
DUF5128
zf-B_box
ANCHR-like_BBOX
GvpO
Motif
Other DBs
NCBI-GeneID:
122528953
NCBI-ProteinID:
XP_043510560
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MDNDKSYNHGADFFGKFPQDIPATESNTNAVDLLCTKTQMNPLPITHNSNASSPGTGSSE
DSNYQIHSDEFGVDSLLSTILQVVNGDFNVPTSRNTQFSQFRDSFHSRCKDCIDSICSCS
TNLQPRNIPNGDYNFLNASEIMNPPIINNSSFNFKTLPMPCEIHHEDPQFYCQTCNRPIC
VKCGFQQHPGHIMINFMEAVEVASTQAKEILNEAKLGVSALREELDATQMAIEILEQKTR
QAATDVMLCVRRVAAALEAREKELLNRIEKARIIKFTALKVRNEGLQNGLARLSIAVEKL
NGAIESNILTNNPLNLLLTKDMTSAEVFQIQQSRQSLPSQEENWISFNGLEASMLTSIAN
FGVVIVNNPGPIGDRRAVRGRGNSPHIKQTIALNLGIGRPIPSNTFPVVVRTNRNCDLSI
KPLRIIGNNSNTMDNLCRPWGVACDRDGHIIVADRSNNRIQIYKQDGQLIRRFGSHGTGP
GQFDRPAGVAVDARRRIIVADKDNHRIQILAMDGLFLLCFGEKGSRYGQFNYPWDVAANS
ECQIVVSDTRNHRVQLFSPEGIFLRKYGFESVASMWKHFDSPRGVAFDPEGNVITTDFNN
HRLIIIDADFMQSRIFDCENSGTSKQFLRPQGLVIDDEGNIIVADSRNHRIQIFDSNGIL
KWRFGNYGKAEDEMDRPSGIALCPDGRIVVVDFGNNRVLLI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggataatgataaaagttataatcatggagcggatttttttggaaaattcccccaagac
attccagcaacggaatcaaatacgaatgcagtagatctactctgtacgaagacgcagatg
aatccattgccaattacccataattctaatgctagttcaccgggcactggatcatctgag
gatagtaattatcaaattcactcagatgagtttggtgtagattcattacttagtactata
ctacaagtagtgaacggcgatttcaatgtaccgacttctcgcaatactcaattttcacaa
ttcagagattcttttcacagtagatgtaaagattgtattgactcgatatgttcatgttct
acaaatctacaacctcgtaatataccgaacggtgactacaattttcttaatgcatcggaa
ataatgaatcctccaatcatcaataattcaagtttcaattttaaaactttacccatgcct
tgcgagattcatcacgaagatccgcaattttactgtcaaacctgtaacagacctatttgt
gttaaatgtggattccaacaacatccaggacatattatgattaatttcatggaagccgtt
gaagttgctagcactcaagcgaaagaaatactgaacgaagctaaacttggagtttcagct
cttagagaagaattagacgctacgcagatggcgatagaaatattagagcaaaaaacgcga
caagcagctacagatgtaatgttgtgcgtaagaagagtagctgctgctttagaggcgaga
gaaaaagaattattaaatagaattgaaaaagctaggattatcaaattcactgcgctaaaa
gtaagaaatgaaggacttcagaatggattggctcgattatctatagctgttgaaaaactt
aacggagcgatagaatcaaatattttgactaacaatccattaaacctgttgcttactaag
gacatgacttccgcggaggtatttcaaatacaacaaagtcgtcagtctcttccgtcgcaa
gaagagaactggatttcttttaacggattagaagcatcgatgttaacttctatagcgaat
tttggagtagttatagtgaacaatccaggacctataggcgatcgacgagctgtaagaggt
cgtggaaactcacctcatattaagcaaactattgcattaaatttgggaataggaagaccc
attccttcaaacacttttccagttgtagttaggacaaatcgcaattgcgacttgtcaata
aaacctctaagaatcattggcaacaatagtaatacaatggataatctatgccgaccttgg
ggtgtagcatgcgacagagacggacatataattgttgcggatagatcgaacaatcgtatt
caaatatataaacaagatggtcagcttataagaagatttggttctcacggtactggacca
ggacaatttgatcgtccggctggcgtagcagtcgatgcacgtcgtcgcataattgtagct
gataaagataatcatcgtatacagattttggcaatggatggcttattccttctatgtttt
ggtgagaaaggcagccgttatggtcaatttaattatccatgggatgtagcagcaaactcc
gaatgccaaatagttgtatccgatactagaaatcatcgcgtccagttatttagtcctgaa
ggtatttttctccgaaagtatggtttcgaatcagtagcaagcatgtggaagcacttcgac
tcaccgcgcggagtagcttttgaccctgaaggaaatgttattactacagattttaacaat
cacagactcattatcattgatgctgattttatgcaaagccgaatttttgattgcgaaaat
tcaggtacttctaaacaatttttaagaccgcaaggtctggtaatcgacgacgaaggcaac
attattgtagctgattctagaaatcatagaatacaaatattcgattcgaatggaatatta
aaatggcgatttggtaattatggtaaagctgaagacgaaatggatagaccatcagggata
gctttatgtcctgatggtagaatcgttgttgtagactttggtaataatcgagttcttctt
atttaa
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