Frieseomelitta varia: 122529410
Help
Entry
122529410 CDS
T09482
Name
(RefSeq) nucleoporin Nup188
KO
K14311
nuclear pore complex protein Nup188
Organism
fvi
Frieseomelitta varia
Pathway
fvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122529410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122529410
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122529410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBN_AB
Motif
Other DBs
NCBI-GeneID:
122529410
NCBI-ProteinID:
XP_043511462
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MEVPTVESLPYCKELWFLISDTVCRCERQLVEDEIKKETKLLKEGLLFFKPFTEASLQNI
PKNDPSPRMYELISKLAPLLNLDATITWDLVCNFIKYEYRNCAETFASQLIDFTSMKALI
DDIWEFYYSERMTLIKCLKLMVEYKDKEHRYQKVFANFFNDVLFGMLLESIQKQIEALKT
MNPPTRSQLCTEEYLHRLYNSSLVEMRELLHILTVIVHDIHITDTNFMKFYESIGGEPRR
LASTKSHEDKKAIARKIKEIQYSQAALVLVTLDVRKHPNMEEWIQSVRSSMQETFEQKCI
RDNSTQDSPLFLAWMLANYAIDPENIDTMNRFRPFGIKAIQLNVFHYLQDLMNSEIICEK
THYAEIVRSSVYNLLTLVCAFVDEDKLNVLNDIFGAVAATIRFTETAARFWEERNDGLWP
VYKFAAEQFPYEFLPLTNIAIGLASASESSAEKIAVELDNLQSLTLEVPRQRDHNKPLRP
YEQECMIHKNSYTILEDSLRENIRILSSDREVMIFRQKASYWDVLHHKIEQLFSQAGGRF
TGTDEMNKNLPEHVSEGLKLLKTLAEHIGIRQSMVIPTELSFEIINRFSYPVLPEEKMYI
YKIVAACISISSELVLEYPEEILSRMRAGVYPRFNNRYQKTLDFAEAVSFDGGIIASWLS
AIETIAHSYPILNTYLDILSKYLIRKYNEEALYTVEIPGMVFLLQGVLPKLDSWYFDSDA
ERTDLWLKSMFCLHRALESSLPKEDIRNELQLVVAYSLLYLEPRHALLKLIRTGERTLHN
KMMAETDWIRGKGFKAIKSVQLALSVVNRLLIFRKSLGLEIGNRSPLEAALYSSPRVPNG
LLIVPTIVNYLYVWFSPPLQAMAVRLLKKFAEGSSMSLLVCMGMDGTAIRETFASRRGLM
SPTCVADVKVAILELVAVCLEKQPGLTEALFNIVHPAECKRIFPRSVEEFFTEGCRQFLV
KYLSRIYEKKDIVCDKLYNSTMALLRAMWYHRNEILVNFFRKRENFWTQLFAPLFREIVP
GAKGYSHLLDIITLELFKSTTPEEDFTKNLKKLLDKSTDYWKKLTIYILNDVHADSEESN
YEKRDPNVTDSLYEINLESWYNFIVTLTDERIATNYPINVSQAQFITQLSLVSLLERVKQ
SCDISSRKITMLLASLTLRCITSWKQMCVDDSRIFKSGLTQLMQEISQAYRNYGKSLRQT
LISLLLGCVQCVKSTLREDATSLEYLLSHACTIAGSELEELKENATQLEKRKQQQYLIEQ
KTIDKKTATIDSVTAQRNADEQNAETVRGIRESLPATLAVCMVTQLLRSYVERSSILKHQ
RKTSCVQLRQMIPELMTCIGITLQKYPYLRFSTAALNLLNLIIRSPYTLHPVNENDIAKL
WLNLIPPGDIGNSMLDSLYNDCQNRQWRCQDWWLLYTLGLEFLIGLVTRETPTVYIKSVV
TFLNSHEYQLMVVSTLLRHTADLYAADLVQSLVALIHIIATQPHIWNSIQPNICETLIKC
MYLAYDNTVNLLLRPRILKFIIDGISVESAEELESCDKRSPSGELKLLVNKLIVINTTCA
LSFVYFSPRLNTLVDTIYTQDFWYTPMAEMNFGPPQMSMSSGPRLTYGTIISSTQLFTQA
LHSRSQPVSSPSVSLSGQPDKANSAKKEWEHAAPEDRRMHSSKDLRRIIHAASGSTSRSS
SNVGSEFLVYVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALTSGRHVAKGVSAG
NDSPVVAKYQKFSDPWFESMDENNTRFALEVNLVLILCQALEGVRSPRIALRDRQLIARE
TVTELGVFFDFLEHRGTPDDWQVKGSLINPDAKSVRTIQQTVDFNQTILPAGLKETKRNK
LEENIFTTGKFTTNISSIQFLPLMRKLLKTVVESLDLAQYR
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggaagtacctactgtagaaagtttaccttactgcaaggaattatggtttttaatatct
gatacggtgtgtcgatgtgagagacaactagtggaagatgaaattaagaaggaaactaag
cttctcaaagaagggctgttgttttttaagccgttcacggaagcgtcacttcagaacatt
cccaagaatgatccatcccctagaatgtacgaattaatcagtaaacttgccccacttctc
aacctagacgctacgattacgtgggatttagtatgtaattttatcaagtatgagtatcga
aattgcgcggaaactttcgcatcgcagcttatagattttacgtcgatgaaagcgttgatc
gacgacatttgggaattttattactccgaaagaatgaccttgataaagtgccttaaactt
atggtggagtacaaagataaagaacatcgttatcaaaaggtgtttgcaaattttttcaat
gatgttctgtttgggatgctattggaatctattcagaagcaaatagaagcgttaaaaaca
atgaacccgcctacacgatcgcagctgtgcacagaagaatatctacacagattgtacaat
agtagtcttgtagaaatgcgggaattactccatatattaactgtcatcgttcatgacatt
catatcacagacactaattttatgaagttttacgaaagcattggtggagagccaagacga
ttagcaagtacaaaaagtcatgaagataaaaaggcaattgctagaaaaattaaagaaatt
cagtatagtcaagcagctttagttttagtaactttagatgtcagaaaacatcccaacatg
gaagaatggatacagagcgtgagaagtagtatgcaagagacttttgaacaaaaatgcatc
cgcgataattctacacaggacagtcccctatttttagcctggatgttggcaaactatgcc
attgatcccgaaaatattgatacaatgaatcgatttagaccatttggtattaaagctata
caactgaatgtttttcattatttgcaagacttgatgaacagcgaaattatctgtgaaaaa
actcattatgctgaaattgtgaggagcagtgtatacaatctactcaccttggtatgcgct
ttcgttgacgaagacaaattgaatgtgctgaatgatattttcggtgccgttgctgctaca
attcgattcaccgaaactgcagcgcgattttgggaagagcgtaacgatggcttgtggcca
gtttataaattcgcagctgaacagtttccatacgagtttttaccgttgacgaatattgca
atcggattggcaagcgcgtcagaatcaagtgccgaaaaaatcgcagtggaactggataat
cttcaatcattaacattggaagtaccgcgacaacgagaccacaataaaccgttaagacca
tacgaacaggaatgcatgattcacaagaattcgtatacaatattggaagattccctccgt
gaaaatatacgtatattatcaagtgaccgggaagtgatgatatttcgtcaaaaggcaagc
tattgggacgtcttgcatcacaaaatagaacaactgttctctcaggcgggtggcagattt
acaggaactgacgaaatgaacaagaatttgcccgagcacgtttcagaaggtttaaaattg
ttgaaaacattagccgagcacatagggatacggcaaagtatggtcattccaacagaatta
agctttgagattataaacagattttcttatccagtattacccgaagagaaaatgtacata
tataaaatagttgccgcttgcatcagtatctcgtccgagctcgtgctggagtaccccgaa
gaaattttgtcacgaatgcgagccggtgtttacccaagatttaataatcggtatcaaaaa
acattggactttgcggaagctgtttcctttgacggtggtataatcgcatcctggttgtcc
gccatagaaacgattgcccattcttatccaattttaaacacgtatctagatattttgtca
aagtatttaatccggaaatataacgaggaagctctatacaccgtggaaatacccggtatg
gtgtttctactgcaaggtgtcttgccaaaattggattcctggtacttcgattcggacgca
gaaagaaccgatttatggctaaaaagtatgttctgccttcacagagcgctcgaatccagc
ctaccaaaagaggacatacgtaatgaattacaacttgtcgtcgcgtacagtttactgtat
ttagaaccacgacacgccttactgaaactgatccgcaccggtgaacgtactttgcacaac
aaaatgatggcagagacagactggattcgaggaaagggattcaaagcgatcaaaagtgta
caattagccttatccgtagtaaatagattactaatatttcgaaaatcattgggtcttgaa
ataggaaatagatcaccgttggaagctgccttatattcttcgcctcgtgtaccgaacggt
cttttaatagtacctacaattgtgaattatctgtacgtctggtttagtccacccttgcaa
gcgatggccgttagattgctgaagaagttcgccgaaggatcttccatgtcgcttttggtt
tgcatggggatggacggtaccgctatacgagaaacgtttgcttctcgcagaggtctcatg
tcgccaacctgtgtcgcggatgttaaagtcgctattctcgagctggttgccgtgtgcctg
gagaaacaacccggtttgacggaagctctctttaatattgtacatccggcagaatgcaaa
cgaatatttccccgatcggtggaagaattctttacagagggatgcagacaatttttagtt
aaatatctaagtagaatttatgagaagaaggacatcgtatgcgacaaattatacaacagc
acaatggcgttgctacgagcgatgtggtatcacaggaacgagattcttgtcaattttttt
cgaaagcgggagaacttctggactcaactgtttgcccccctcttcagagagatagtacca
ggtgcgaaaggttattctcatctgttagatataataacgttagaactgttcaagagtact
acgccggaagaggattttaccaaaaacttgaagaaacttttagataaatcgacggattac
tggaaaaagctgacgatatacattctgaacgatgtacacgccgatagcgaagaatcaaat
tacgagaagcgagatcctaatgtcacggattcgttgtacgaaatcaatttggaatcttgg
tataattttattgttacattaaccgacgaaaggatagcaacgaactatccgatcaacgta
tcccaggcgcagtttataacgcaactttctttagtgtcactgctggaacgagtcaaacag
tcttgtgatatttctagccgaaaaatcacaatgctattggcgtctttgacgctccgatgt
atcacctcttggaaacagatgtgcgtcgacgattccagaattttcaagtctggactgaca
cagctaatgcaggaaatcagccaagcttatcgtaattatggcaagtccctgcgtcaaacg
ctgatctctttgcttcttggatgcgtgcaatgcgtgaagagcacgttgcgcgaggacgcg
acgagcctcgagtatcttttgtcgcacgcttgtacaatcgccggcagcgaattggaggaa
ctgaaggagaacgctacccaactagagaaacggaaacaacagcagtatttgatcgagcaa
aagacaatcgataagaagacagcgacgattgatagcgtgacagcgcaaaggaacgccgac
gaacagaatgcggagactgtccgtgggattcgggagagtttaccagcaaccctggctgtt
tgcatggttacccaattgttacgctcctacgtagaacggagctctatattgaaacatcaa
cggaagaccagctgcgtgcagcttcgacagatgataccggaactgatgacgtgcatcggc
atcacattgcaaaagtatccgtatttaagatttagcactgccgctcttaacttgctcaat
ctgatcattcgttcgccatatactttgcatcctgtcaatgagaacgacatagcgaaacta
tggctgaacttgataccacccggtgacattggaaacagcatgctggactcgttgtacaac
gactgccagaacagacagtggcgatgccaagattggtggcttctgtacacgctcggtctt
gaatttctaataggactcgtcactagagaaacgcccaccgtctatataaaatctgtcgtc
acatttctaaattcccacgaatatcaattgatggttgtgtcaaccttgttaagacacacg
gcggatctttatgccgcggacttggtacaatctctcgttgctctcattcatatcatagca
acgcagccccacatctggaactcgatacagccgaatatctgcgaaactctgattaaatgc
atgtacctagcgtacgataataccgtgaacttgttgctgcgaccccggattctcaagttc
atcatcgatggcatcagcgtggaaagtgccgaagagttggaatcctgtgacaaaagatcg
ccaagtggtgaattaaaattgctggtcaacaagctcattgtcataaacacaacctgtgcg
ttgagcttcgtttatttttcaccgaggctgaacactctcgtggacactatatacacgcaa
gacttttggtacactcctatggcagaaatgaacttcgggccacctcagatgagcatgagt
tccgggccgcgattgacttacggcacgataatcagttcgacgcaattgttcacgcaggct
ctacattcccgatcccagcccgtgagcagtccgtctgtttctcttagcgggcaaccggac
aaagcaaactctgctaagaaggagtgggaacacgccgcgccagaagatcgacgaatgcac
tcgagcaaagatttaagaaggatcatccacgcagcatccggttctacttcgaggtcgtct
tctaacgtaggaagtgaatttttggtgtacgtcagtggtctagatgtgaccgtaccgttg
ttaagtagtccaagacttgtgcgaagaccgtacgatcctcttatttgcgagaatactatt
ttgtcaagggcaacagccttaacaagcggtagacacgtggcgaaaggagtatccgctggg
aacgatagtcccgttgtagcaaaatatcaaaaattcagcgacccttggttcgaatctatg
gacgaaaacaatacgagattcgctcttgaggtcaatctcgtgttgatcttgtgtcaagcg
ctagaaggtgtcaggagtccaaggatcgcgcttcgagatcgtcagctgatagcacgtgaa
acagtaaccgagttaggagttttcttcgattttcttgaacatcgtggcacacccgacgat
tggcaagtcaaaggatcgttaattaaccctgacgcgaaaagcgtaagaactattcaacaa
actgtcgacttcaatcaaactatcctgccggccggattaaaggagacaaaaagaaacaaa
cttgaagagaacatatttactacagggaaatttacaaccaatattagcagcatacaattt
ttgccactgatgagaaaattattgaaaacagtggtggaatctttagatttagcacaatat
cgataa
DBGET
integrated database retrieval system