Frieseomelitta varia: 122529647
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Entry
122529647 CDS
T09482
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03013
Nucleocytoplasmic transport
fvi03015
mRNA surveillance pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122529647
09122 Translation
03013 Nucleocytoplasmic transport
122529647
03015 mRNA surveillance pathway
122529647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122529647
03041 Spliceosome [BR:
fvi03041
]
122529647
03009 Ribosome biogenesis [BR:
fvi03009
]
122529647
03012 Translation factors [BR:
fvi03012
]
122529647
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122529647
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122529647
mRNA cycle factors
Stress granule specific factors
122529647
Spliceosome [BR:
fvi03041
]
Complex C
Other components
EJC/TREX
122529647
Ribosome biogenesis [BR:
fvi03009
]
Eukaryotic type
90S particles
Helicases
122529647
Translation factors [BR:
fvi03012
]
Eukaryotic type
Initiation factors
eIF-4
122529647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
122529647
NCBI-ProteinID:
XP_043511894
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MAEVKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS
IKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtgaagtcacgtcgcgtcgcgcaaacagaagatttatcaaacgtcgagttc
gaaacaagcgaggatgtggaagttattccaactttcgacaacatggggctcagggatgag
ttgttgcgcggaatttacgcttacggtttcgaaaagccgtccgcgattcagcagcgatct
atcaaacctataatgaaaggtcgggatgtgatagcacaagcacaatctggtacaggcaag
acagcaacattttccattgctatactgcaatcgttggatacgcaagtcagagagacacaa
gtgctggttttatcacccacgagagaattggcaactcaaatacagaaggttattttggct
ttgggtgattttatgaacgttcaatgtcacgcttgtataggtggcacaaatcttggggaa
gatatcagaaagttggattacggacagcatgttgtgtcgggcacacctggaagagtattt
gatatgataaagaggagagttcttagaacaagagctataaaaatgttagtccttgacgag
tctgatgaaatgttaaacaagggcttcaaggaacaaatttacgatgtatatagatatttg
ccacccgcaacacaggttgtgttagtatctgcaacattgccacatgagatcctcgaaatg
actagcaaatttatgacggaccctattcgtattcttgtaaaacgtgatgaattgacatta
gaaggaataaaacagttcttcgttgctgttgaaagagaagaatggaaatttgacacactg
tgtgatttgtatgatacactgacaataacacaagcagttatcttttgcaataccaagcgt
aaagtagattggttaactgagaagatgagagaggcgaatttcacagtttgctctatgcat
ggtgacatgccacagaaagaaagagataacatcatgaaagaatttcgatctggtcaaagt
cgtgttttaattacaactgatgtatgggcaagaggaatagacgttcagcaagtatctctc
gtgatcaactatgatttgcccaataatcgtgaattgtacattcacagaataggacgatcg
ggaagattcggaagaaaaggtgtttccattaattttgtaaaaaccgacgacataagaatt
cttcgagatattgaacaatattattcgacgcaaattgatgagatgccgatgaatgtagca
gacttaatataa
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