Frieseomelitta varia: 122529749
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Entry
122529749 CDS
T09482
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03020
RNA polymerase
fvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122529749
09124 Replication and repair
03420 Nucleotide excision repair
122529749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvi03021
]
122529749
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122529749
Enzymes [BR:
fvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122529749
Transcription machinery [BR:
fvi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122529749
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122529749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
DUF5817
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
122529749
NCBI-ProteinID:
XP_043512098
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MYSLEDDQYDDEDTEEISTKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIIE
DSPQIDLQAEAQHTSGEVENPIRHLLKFEQVYLSKPTHWEKDGTPSPMMPNEARLRNLTY
SAPLYVDITKTIVKDRNDPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWINMM
AKSGASIKKSAIGQRIIAIIPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGISDFCETK
KAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLVKEVRLYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGDAGRISRPLLIVEGQ
SLLLKKSHIDMLKERDYNNDGWQQLVGSEVVEYVDTLEEETVMIAMIKFLQVLVGQPMEA
RARDGGLRFGEMERDCQXRERLFEASDPYRIHICNFCGLIAIANSRNNTFECKGCKNKTQ
VSQIKLPYAAKLLFQELMAMNIAPWLMVT
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtattccctggaagatgatcaatatgatgatgaagatacagaagaaatttcaacaaaa
ctttggcaagaagcctgttggattgttattaatgcctattttgatgaaaaaggtcttgta
agacaacaacttgacagttttgatgagtttattgaaatgtcagttcagagaatcattgag
gattcacctcaaattgatttacaagccgaagcacaacatacttctggtgaagtagaaaat
cctattagacatttattaaaatttgaacaagtttatttgtctaaacctacgcattgggaa
aaagatggaactccatcccctatgatgcctaatgaagcaaggctacgaaatttgacatat
tcagcaccattgtatgtagatataactaaaacaattgtaaaagatagaaacgaccccatt
gaaacacaacaccaaaaaacgtttataggaaaaattccaatcatgttaagatcaaaatat
tgtttacttgctggcttatctgatcgtgatttaacagagttgaatgaatgtccattagac
ccaggaggctactttattattaatggatcagaaaaggtacttattgcccaagaaaaaatg
gcaacaaatacagtttatgtctttagtatgaaagatggcaagtacgcatataaatcagaa
attcgttcttgtttggaacatagttcacgacctacatccacgttgtggattaacatgatg
gcaaagagtggagctagtattaaaaaatctgctataggccaacgtattattgcgattatt
ccatacattaaacaggaaattcctattatgattgtgttccgcgcacttgggtttgtggca
gatcgcgatattttagaacatatcatatatgattttgatgatcctgaaatgatggaaatg
gtaaaaccttccttagatgaagcattcgtaatacaagaacaaaatgtggccctaaatttt
ataggtactagaggtgcaagacctggagtaaccaaagaaaaacgtattaaatatgctaga
gaaattttacaaaaggaaatgcttccacatgtaggtataagtgatttttgtgagaccaaa
aaagcttactttcttggttacatggtacatcgtttactgtcagcctctttgggccgaaga
gaattggacgaccgagatcactatggtaacaaaagactagatttagctggacctttactg
gcattcttattcagagggctgtttaaaaatctagtgaaagaagtgcgattgtatgcgcag
aagttcatagatagaggaaaagattttaaccttgaacttgctataaaaaccaaaattatt
actgacggcttaagatattcgcttgccacgggaaattggggagatcaaaagaaagctcat
caagctagagctggtgatgctggaaggatcagtaggcctttattaattgttgaaggacaa
agtctgttattaaagaaaagtcatattgatatgttaaaggaaagagattacaataatgac
ggatggcaacaattagttggtagtgaagttgttgaatatgttgatacattggaagaggaa
actgttatgattgcgatgatcaaattcttacaagttctggttggacaacctatggaagca
agagcaagagatggaggtttgcgatttggtgaaatggaacgtgattgtcaanaaagggaa
cgtttgttcgaagcatcagatccatatcggatacatatatgtaatttttgtggtttaatt
gcaatagctaattcgaggaataatacatttgaatgcaagggatgtaaaaacaaaacacaa
gtttctcaaattaaattgccatacgcggcaaaattactcttccaagaacttatggcaatg
aacattgcaccctggttaatggtaacataa
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