Frieseomelitta varia: 122529789
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Entry
122529789 CDS
T09482
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122529789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122529789
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122529789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
EGF_TEN
Soc
Motif
Other DBs
NCBI-GeneID:
122529789
NCBI-ProteinID:
XP_043512169
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MPVDQRRINGPEVSVPYHIYSDFDKKSDKEKHDFSKRSDKRTDNEMRKIFLKTGIVSQAK
GSAYIEIGNTKVVCSVFDPRELSNKNGYCMQGEIYCEFKFAPFSCQKRKIHQQNAEEKQY
SLILQRALEPAVCLHEFPNFQVDVYVMVLDNAGSSLAAAIMAASTALANAGVPMFGLVTA
STIGIYGNHYLMDPTDTEEGICNTQPDNEDDFNHGIITLASLPQHNQISEVFLIGSIDTN
TINQATEILTAANKDICPVLQQCLVKTIMKLHNEKK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgatcaaagacgtatcaatggtccagaagtatctgtgccttatcacatttat
tcggatttcgataagaaaagcgacaaagagaaacatgattttagtaaaagaagtgacaaa
cgaactgacaatgaaatgcgaaaaatatttttaaaaacaggaatcgttagccaagcaaag
ggctctgcatacatagaaataggaaatacaaaagtagtttgttcggtgtttgatcctaga
gaattatcgaacaagaatggctactgcatgcaaggggaaatttattgtgaatttaagttt
gccccgttttcttgtcagaaacggaaaattcatcagcaaaacgccgaagaaaaacagtat
agcttgattttacaaagggcattagaaccagctgtttgtttgcatgaatttcccaatttt
caagtggatgtatatgtaatggtcttggataatgctggttcttcattagctgctgcaatt
atggctgccagtaccgctttggctaatgcgggcgttcctatgtttggtttagttacagct
tcaactataggtatatatggtaatcattacttaatggatcctacggatacagaagaagga
atatgtaatacacaaccagataatgaagatgattttaatcatgggataattacattggct
agtcttccgcaacataatcaaatatctgaagtatttctaattggtagtatcgacacaaac
actattaatcaagcaacagaaatattaacagcagctaacaaagatatttgtcctgtactt
cagcaatgtttagtaaaaactattatgaaactacataacgaaaaaaagtaa
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