Frieseomelitta varia: 122529858
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Entry
122529858 CDS
T09482
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
fvi
Frieseomelitta varia
Pathway
fvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122529858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvi03021
]
122529858
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122529858
Transcription machinery [BR:
fvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122529858
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122529858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
zf-CCHC
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
122529858
NCBI-ProteinID:
XP_043512277
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MKLMFVVYTVVNRSVIIESFRTIMECLVANVDNMRFDIEIALDEQYGALPLPFTGMDKST
AAVCQFYPRGTCVKGASCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY
FYSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCP
EGPNCKFMHPRFELPAVQDMQPKEGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQE
IEGNSHATHHMNTHNGPPPRGPQKPLEEVTCYKCGTKGHYANKCPKGHLAFLSHAGGSGS
STQNQNYRR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatgtttgttgtgtacacggtagtaaatagatctgtgattattgaaagcttt
cgaacaataatggagtgtctagtggcgaatgttgataatatgcgatttgatattgaaatc
gcccttgatgaacaatatggagcacttcctttaccctttacgggaatggacaaatctact
gctgcagtatgtcagttctatccaagaggtacatgcgttaaaggagcctcctgtccgttt
aggcatgtacgaggagatcgcacaatagtatgtaaacattggttgagaggtctttgtaag
aaaggtgatcagtgtgaatttttacacgagtatgatatgacaaaaatgccagaatgttat
ttttattctagattcaatgcttgccacaataaggaatgtccattcctacatattgaccca
gaaacaaaagtcagggattgcccttggtatgatcgtggattttgtagacatggaccatta
tgcagacatagacatgttcgtcgtgttttatgtatggcatatttagctgggttttgtcct
gaaggaccaaattgtaaatttatgcacccaagatttgaattaccagcagtgcaagatatg
caacctaaagaaggaaaaaaagtaatgatcacatgtcatttttgtggagaaggtggtcac
aaagcaatttattgcaataaaatgccacctgatgtacgtgaagctcaagttagacaagaa
atagaaggtaattcccacgctacacatcacatgaatacacataatggacctccaccaaga
ggtccccaaaaaccacttgaagaagtcacttgttataaatgtggaactaaaggccattat
gctaataaatgtccaaaaggtcatttagcatttttaagtcatgctgggggtagtggaagt
agtactcaaaatcaaaattatcgtagatga
DBGET
integrated database retrieval system
