Frieseomelitta varia: 122529947
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Entry
122529947 CDS
T09482
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
fvi
Frieseomelitta varia
Pathway
fvi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122529947
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fvi02000
]
122529947
Transporters [BR:
fvi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
122529947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
RsgA_GTPase
SMC_N
AAA_30
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122529947
NCBI-ProteinID:
XP_043512442
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MYKGIRNIESRESEIRRTSTSRRMDTCGVYLSQLRAMLVRNLLLKKREKRKTTAEIFLPL
CTLGVLIVVKVLPPNPNYPAMTTQRQEGGIFETFNGYKNNTIAVVPNSTETLTFLNSMNT
LWLSMWDYPGKLPLNFMVFDTKDDLQAAYWRDPYSVPLAVIFEDSKPISQHLLYEIRTNP
SYTNPPSPTELYSAPVTCRKDTSHWLGGVLSIETGGSCPVNNYLHSGFLALQMIVDITKI
RLDTGNTDLTVPDIKLEMFPKEAFTADWMLAFRVVIPLFMVLALSQFVTYLLILIVGEKE
KKIKEGMKIMGLKDSIFWLSWFIIYSVFVLLLSAVGVILLFTLQMFQHTHFLPIFLLVVL
YSFSIIMFAFMITPFFDKSRTAGVLGNFAVTIMSLMYFIQVFINDSSSVPFWLVSLLSPT
GVALAMDKALVLDLQGEGVNFDNLWSGPGIPFGGSLIMMTLDIILYACLAYYFDSVIPSE
YGTKRTPWFCFTPEFWCQRKAPRVPSSNGESNSFIPGEETNRDVEPVVREMKGREAIRIV
DLYKSYQKCRKAEIKAVNGINLTIYEGQITAILGHNGAGKTSLFNILTGLTAPTAGTALI
FGYDVRDSNDMQMIRSMTGVCPQHDILFDLLTPREHLEFFAAVRGIPKSMIEHEVKKTLK
DIDLTEKADTFAKYLSGGQKRKLSVGIAIIGDPKIIILDEPTAGVDPYSRRQMWSFLQSR
RHGKVILLTTHFMDEADILADRKAVISKGKLRCCGSSLFLKNKFGIGYHLTLVLEGNARE
HAITRLVTSHVSKAEKARRHGRELSFILPHNSVESFAPLFSAIEHEIKTRSSRLGISSYG
VSMTTLEEVFLHLEKDEGPEYTMDNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVTVQ
NDGQAKEAGDLPDGVHNDRNPPVLGLGLDPIKIRPNFLQTLYAMLRLRILRLFRNIQLLY
FTIVAPLFLVVVGLHLNSIQTVEVKMHSLKLNTDTYGNETKILYANNTDHDITDLIDGIS
QNVKNIEEYYGNFANLLKIAPHIAAFNITEYSLSRINLTVAYNDTMQHSLPILINLLSNT
YYRLISDEDNTKPIEVKTHPFQQTSQPQEFNIGTASSALFIGMNFVLLPITLVVDMVYDR
EIKAKNQLRVNGLSFSMYFLTYFIVLVGLMTFICLCILGIIFLFDVPSLQEIPALITLGG
LLMLYCPSSILFSTCLSYIFDKMDSAQSILPNIATFIGLIPFILVTILDMLGLSGTAAFI
LHVIFSLLNTLYVPYAAVYYVERVHLMCSINAACHHLTMSDYLTTEIILMAFGVLLHCPV
WFFVLLLLDIKKSGGNVSDILKHFLRNGGSIGEEIMENSDVGEHEDADVKAEKQKVFNLI
SSSSVQEPPVVLVQNLRKEYRQKDTGSCSCCSKQDEEASQIQRKVAVRNLSLAVEPGEVF
GLLGHSGAGKTTTMKIIIAEEAASRGRVQIGGHNINSSMTEAFKQMGYCPQHDAQWKNIT
VREHLECYAAIRGVPWSDIGRIVDLYLTGLQIHEHADKQTQECSGGTRRKLSFAMAMIGG
PKVVLMDEPSAGMDPRSKRFLWDTILASFQGGRGAILTTHSMEEADALCSRVGIMVKGEL
RCIGSTQHLKNLYGAGYTLEMKLLGGDCTPTTPSGDRITSLKEFVSSLFPDATLEESFAD
RLVFAVPQHAVTSLAECFTQLEKAKLELDIEEYSFSQTTLEQVFLKFSHYDESNSGE
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaggtataaggaatattgaatcgagggaatcggaaatcagaaggacgagtaca
tctcgcagaatggacacgtgcggggtctacttgtctcaactacgagcgatgctcgtgagg
aatctcttgttgaagaagcgcgagaagcggaagactacggcggagattttcctccccctt
tgtaccctaggagtgttgatagtagtaaaagtattgccaccaaatccaaattatcccgca
atgacaacgcagaggcaggagggtggtatattcgagacgttcaatggctacaagaacaat
acgatagccgttgttccaaactcaacagaaactttgacctttttaaattcgatgaatacc
ttatggttatcaatgtgggactatcctggcaaacttcctttaaatttcatggtgtttgat
acgaaggatgatctgcaagcggcatactggagagacccatatagtgtacctttggcagta
atcttcgaggattctaaacctatatctcagcatctattgtatgagataagaactaatcca
tcatatacgaatccaccttcaccgactgaattatattccgccccagttacttgccgaaaa
gatacgagccactggttgggtggcgtattgtcgatagagactggtggatcatgtcctgtg
aataattatttgcactcaggtttcctggcattacaaatgatagtggatattacaaagata
agattagacacagggaatacagatttaactgtaccagatatcaaactagaaatgttccct
aaagaagctttcaccgcagactggatgctggcctttagagttgttatacctctttttatg
gtcctggctctttcgcaatttgtcacttaccttctgatcctgatagtcggtgagaaagag
aaaaagatcaaagaaggaatgaagataatgggcctaaaagattcgatattctggttatcg
tggttcattatctacagcgtttttgtcttattactctctgctgttggagtaatactactg
tttacattacaaatgtttcaacacacacactttttaccaatattccttttggtagtgctc
tatagtttctccataatcatgttcgcttttatgataacacccttcttcgataaatcacga
actgccggtgtgcttggcaatttcgcagtcacgataatgagcttgatgtactttattcaa
gtctttataaatgactctagctcagtcccgttttggttagtctctcttcttagtccaact
ggcgttgctttggctatggataaggctcttgtactagatctacaaggagagggagtcaac
tttgacaatctttggtcaggtcctggtataccatttgggggaagtcttattatgatgact
ttagatataattctctatgcttgcttagcttactattttgactctgttataccaagtgaa
tatggaacaaaaaggactccctggttttgcttcacgcctgaattttggtgtcagagaaaa
gcaccacgggtaccatcatcgaacggtgagtcgaattctttcatccctggtgaagaaact
aaccgtgacgttgagcctgtagtccgtgaaatgaagggtcgtgaagcaattagaatagtc
gatctttacaaatcttaccagaagtgtcgtaaagcagaaattaaagccgtgaatggtatt
aatttaactatttacgagggtcaaattacggcgatacttggacacaatggagctggcaaa
acaagtcttttcaatatattaactggcctgaccgcacctaccgctggcactgctttaata
tttggttacgatgttcgagattctaatgatatgcagatgattagaagtatgactggtgtt
tgtccacaacatgacatccttttcgatcttctcacacctcgcgagcatcttgaattcttc
gctgctgtacgtggcatcccaaaatcgatgattgaacacgaggtaaaaaagactttgaaa
gatattgatttaactgagaaagcagatacttttgcaaaatatttaagcggggggcaaaag
agaaaattgtctgtaggtatcgccattatcggtgatccgaagattattatcctcgatgaa
ccaacagctggagttgatccctactctaggagacagatgtggtctttcttacagtctaga
cgtcacggaaaagtgattctattgacgacccattttatggatgaagcagatatattagct
gataggaaagcagttattagcaaaggaaagctgaggtgctgtggcagttctttgttctta
aaaaataaatttggcatcggatatcacttaacgttagtacttgaaggaaatgcgagagaa
cacgccattaccagattagtaacatctcatgtatcgaaagcagaaaaggcaagacgtcat
ggacgcgaactgagttttattttacctcacaattcagtggaaagcttcgcaccacttttc
tcagctatagaacatgagatcaaaactcggtcaagtagattaggcatcagtagttacgga
gtatcaatgactactttagaagaagtatttctgcatttagaaaaggacgaaggccctgag
tatactatggataatttatcaaaaaagatggtgcgcaatcgtgcattaagcagatcttta
tcattgcaatctaagagtacttcttatcagagtttgcagaacgaaggtgttactgttcag
aatgacggtcaagcaaaagaggcaggagatttaccggatggcgttcataatgataggaat
cctcctgttcttggcctcggattagaccccataaaaattcggcctaacttccttcaaacc
ttatatgctatgcttcgcctaaggatactcagactctttagaaacatccagctattgtac
ttcactatcgttgcgcctctttttctagtagttgttggccttcatttaaatagcattcaa
acagttgaggtcaagatgcattctcttaaattgaataccgacacctacggaaatgagacc
aaaattttgtacgcgaataataccgaccacgacatcacagatttaatagatggaataagt
caaaatgtaaagaacattgaagaatattatggaaattttgcaaatttgttaaaaattgca
ccacacatagctgcttttaacatcactgagtatagtttatctagaatcaatttaactgtc
gcatataacgacaccatgcaacattccctaccaatcttaataaacctattatcaaacact
tattacagattgatctcggatgaagataatacaaaaccaattgaagttaagacacatcct
tttcagcaaacttctcagccacaagaattcaatattggcacagcgagttccgctttgttt
attggaatgaattttgtattgttaccaataactttagttgtagacatggtctacgatcgt
gaaataaaagcgaagaatcagcttcgtgtcaatggtctgtctttttctatgtactttctg
acgtactttattgtacttgtcggcctgatgactttcatttgtttatgtattcttggcatc
atatttctctttgacgtgccttcgcttcaagaaataccagctcttattactttaggtggt
cttctgatgctttattgtccatcatccattctattctcgacatgtttgagttatatcttt
gataagatggattctgctcaaagtattttgccgaatattgcaactttcattgggcttata
ccgtttatactagtcacaattcttgatatgctgggccttagtggaacagcagcgttcatt
ctacatgtaattttttctttactgaacacattgtacgtaccatatgctgcagtgtattat
gtagaaagagtacatctaatgtgctctattaatgctgcttgccatcatttaactatgtct
gattatttaaccacggaaatcattttaatggcctttggcgtgcttctgcactgcccggtg
tggtttttcgtgcttttactgttagacattaaaaaaagtggtggtaatgttagcgatata
ttgaagcatttcctgcgtaatggcggatcgattggtgaggaaataatggaaaactctgac
gttggtgaacacgaagatgcagacgttaaagcagaaaagcagaaagtcttcaatttaatt
agttcatcatccgttcaagagccacctgtagttctagtacagaatttgaggaaagaatat
cgacaaaaagatacaggatcatgcagttgttgttcaaaacaagatgaagaagctagtcaa
atacaacgaaaagttgctgtaagaaacctttcgttagcggttgaaccaggggaagtattc
ggtttattgggtcacagcggtgctggcaaaacgacaacaatgaagattattatagctgaa
gaagcagccagtcgaggcagagtgcagatcggtggtcataatattaattcaagtatgaca
gaagcttttaaacaaatgggatattgtccccaacacgatgctcaatggaagaatattact
gttagggaacacttggaatgttacgccgccattcgtggtgtaccatggagtgatatcggc
agaatcgtggatttatatcttactggtttgcaaattcacgaacacgccgacaaacaaact
caggaatgttcgggtggaactagaaggaaacttagttttgccatggcaatgatcggaggt
ccaaaagttgttttaatggatgaacctagtgcgggaatggatcctaggtcaaaaaggttt
ttgtgggatacaattcttgctagttttcagggtggtagaggtgcaattttaaccactcat
tcaatggaagaagctgatgctctctgttccagagtgggtataatggtgaaaggagagtta
agatgcattggctctactcagcatctcaagaatttatatggcgcaggctatacccttgaa
atgaaactcttaggcggtgattgtacaccaacgacaccctccggtgatagaattactagt
ctgaaagaatttgtttccagtctttttccagatgcaactctcgaagaaagttttgccgac
agattagtttttgctgttcctcaacatgcagtcacctcgctggccgagtgtttcacgcag
ttggagaaagccaagctcgagttagatatcgaagaatacagttttagccaaactactttg
gagcaagttttccttaaattttcccactatgacgaatctaattcaggagaatga
DBGET
integrated database retrieval system
