Frieseomelitta varia: 122530207
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Entry
122530207 CDS
T09482
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122530207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvi03041
]
122530207
03009 Ribosome biogenesis [BR:
fvi03009
]
122530207
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122530207
Spliceosome [BR:
fvi03041
]
Complex A
U1 snRNP components
U1 related factors
122530207
Complex B
122530207
Ribosome biogenesis [BR:
fvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
122530207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122530207
NCBI-ProteinID:
XP_043512903
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MLRHIMGGLGSLRIRTYGASYHSGNYRTKERGSVYKNNANNRNGRFENRNKNNMHGNIGP
LKKPNWNFVNLEPFKKDFYIPHPNVQSRHPQEVDIFRQENQITLKGEKIPNPIQHFEEGN
FPDHVMQCIRKHGFNEPTAIQAQGWPIAMSGQNMVGIAQTGSGKTLGYILPAIVHISSQQ
ALSHGDGPIALILAPTRELAQQIQKVTQTFSYVKSTCIFGGAPKGSQARDLEQGVEICIA
TPGRLIDFLERGVTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWP
KEVRNLAEEYLVDYTQLNIGSLTLAANHNILQIVDVCEEHEKQTKLQNLLQEISSINPDD
GKTIIFVETKKKVEVITRTIRRYGWPAVCIHGDKSQTERDFVLTEFRRNKDSILVATDVA
ARGLDVNDVKYVINFDYPTSSEDYIHRIGRTGRSNNAGTSYAFFTPQNGRQVKGLINVLR
EAKQVINPKLLELADKNDNDSMRNRWGNGNYRRRETIFPKTHTRFENLSYAS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacatataatgggaggccttggatctctcagaattaggacgtacggagctagt
taccatagtgggaactatagaacaaaagaaagaggatctgtatataaaaataatgctaat
aatagaaatggacgatttgagaatcgcaataaaaataatatgcatggtaatatcgggccc
ttgaaaaagccaaattggaactttgtaaatttagagccttttaaaaaagatttttatata
ccacatcctaatgttcaatcacggcacccacaagaagtagatatatttagacaagaaaat
caaattactcttaagggagaaaaaattcctaatcctatacaacattttgaagaaggaaat
ttccctgatcatgtaatgcaatgtatcagaaaacatgggttcaatgaaccaactgctatt
caggctcaaggttggccaattgctatgtctggacagaatatggttggaatagcgcaaact
ggatctggaaagactttaggatatatccttcctgcgatagtacatattagcagtcaacaa
gctttaagtcatggtgacggaccaattgctctaattctagcaccaacaagagaattggca
cagcaaattcagaaagttacgcaaacttttagttacgtaaaaagcacttgtatttttggt
ggagcaccaaaaggaagtcaagctcgtgatttagaacaaggagttgagatttgcattgct
acacctggacgattaattgactttttggaacgtggtgtaactaatttacgtagatgcaca
tatttggtgttagatgaagcagatagaatgttggatatgggttttgaaccacagatccgt
aaaattattgaacaaatcagaccagacagacaagtgctgatgtggtctgcaacttggcca
aaagaagttcgaaatcttgcagaagaatatcttgtagactatacacaattgaacattgga
tcattaacattggcagctaatcataatattcttcaaattgttgatgtttgcgaagaacat
gaaaaacaaacaaaattgcaaaatcttcttcaggagatcagtagtatcaatccagatgat
ggaaaaacaataatttttgtagagacaaagaaaaaagtggaggttatcactagaactatt
cgtcgatatggttggccggctgtatgtatacacggtgacaaatcacaaacagaaagagat
tttgttcttacagaatttagaaggaataaggattcaattcttgtagcaacagatgttgct
gctcgtggattggatgtcaacgatgtaaagtacgtgatcaacttcgattatccgacttca
tctgaagactacattcatagaattggcaggacaggccgttcaaataatgcaggaacgagt
tatgcattctttacaccacaaaatggccgacaagttaaaggtttaattaatgtacttaga
gaagcgaaacaagttatcaatccaaaacttttggaacttgcagacaaaaatgataatgat
tctatgcgaaatcgttggggcaatggaaattaccgcagaagagaaacaatttttcctaaa
acacatacacgattcgaaaatttaagttacgcctcatag
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