Frieseomelitta varia: 122530466
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Entry
122530466 CDS
T09482
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
fvi
Frieseomelitta varia
Pathway
fvi03015
mRNA surveillance pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122530466
09123 Folding, sorting and degradation
03018 RNA degradation
122530466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122530466
03041 Spliceosome [BR:
fvi03041
]
122530466
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122530466
mRNA cycle factors
Stress granule specific factors
122530466
Spliceosome [BR:
fvi03041
]
Complex C
Other components
Complex C specific factors
122530466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_10
RRM_occluded
Nup35_RRM_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
122530466
NCBI-ProteinID:
XP_043513396
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNPGAPNYPMASLYVGDLHGDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEEMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFE
DPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYV
KNLDDSIDDERLRKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRII
VTKPLYVALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFY
GPAQMAQIRTTPRWPAQPNQVRPNTQTGSSGFATMQGPFRAAPRAPTAQTGTMRSTLSAR
PITGQQAVGGANMQNRSMAGPAVGVSTQNRPSNYKYTSNMRNPPQAMALPAPTPVQQAVH
IQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLE
HNESLKAKVEEAVAVLQAHQAKQAVASKKE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaggggctcctaattatcctatggcgtcactctacgtcggcgatttgcacggt
gatatcaccgaggcgatgcttttcgagaagttttcatcggctgggcctgtactctcgata
cgcgtctgtcgcgatatgattacccgacgctcgcttggatatgcttatgttaatttccag
caacctgctgacgcggaacgagcacttgatacaatgaattttgatatgataaaaggacgg
ccaattcgtatcatgtggtctcaacgtgatccatctcttcggaaatctggtgttggaaat
gtatttataaaaaatttagataaaaatatagacaataaagcaatgtacgatacgttctct
gctttcggtaacatacttagttgcaaagtagcgcaagatgaatccggcgtttctaaaggt
tatggttttgtccattttgaaactgaagaagcagcaaacaaatctattgatagagttaat
ggcatgttgctaaatggaaaaaaggtatatgttggtaaatttataccccgcaaagaacgt
gaaaaggaattaggagaaaaagctaaactgttcaccaatgtttatgtaaagaattttggg
gaagagatgacggatgataaacttaaagaaatgttcgaaaagtatgggaccatcaccagt
cacaaagttatgatcaaagatgacgggaaatctcgaggatttggttttgttgcgtttgaa
gatcctgacgctgctgaacaagcagtactggaattaaatggaaaagaagttgctgaagga
aagtgtatgtatgttggacgggcgcaaaagaaggcagagcgtcagcaagaactgaaacga
aagtttgaacaattaaaattagaacgtttaaatcgttatcaaggagtaaatctatatgta
aagaatttggacgatagtatagatgacgagcggttacgcaaagaatttgcaccttttgga
acaattacgtctgctaaagttatgatggaagaaggacgcagtaaaggctttggatttgtc
tgtttttctgctcctgaagaagctaccaaagctgtaacggaaatgaatggtcgtataata
gtaacgaaacctttatatgttgctctggctcagcgtaaagaagatcgtaaagcgcatctt
gcttctcaatatatgcagcgtttggcaaacatgcgaatgcagcaaatgggtcaaattttt
cagcctggtggtgccggaaattatttcgttcccactattccacagccacaaagattctat
ggacctgcacagatggcccaaattcgtacaacaccacgttggccagcgcaaccaaatcag
gtgcgacccaatacacaaactggaagttcaggttttgctacaatgcaaggtccatttaga
gctgcaccacgagctcccactgcgcaaactggtacgatgcgaagtactttgtctgctcga
cctatcacaggtcaacaagcagttggcggtgcaaatatgcaaaatcgttcaatggctggt
ccagcagtgggagtgtcaactcaaaaccgtccatcaaattacaaatacacttcaaacatg
cgtaatccaccacaagcaatggcactccctgccccaactcctgtacagcaagctgttcat
attcaaggccaagaaccactaactgcctcaatgctggcagctgctccacctcaagaacaa
aaacaaatgttgggagaacgtctcttcccactgattcaatgtatgtatccgcaacttact
ggaaagattacaggaatgttgctggagattgacaactcggagctcctgcacatgttggag
cataatgaatcgctgaaagccaaggttgaagaggccgtagctgtattgcaagctcatcag
gccaaacaggctgtggcttctaaaaaagagtaa
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