KEGG   Frieseomelitta varia: 122530712
Entry
122530712         CDS       T09482                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
fvi  Frieseomelitta varia
Pathway
fvi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122530712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fvi03400]
    122530712
Enzymes [BR:fvi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122530712
DNA repair and recombination proteins [BR:fvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     122530712
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase BRCT
Other DBs
NCBI-GeneID: 122530712
NCBI-ProteinID: XP_043513850
LinkDB
Position
Unknown
AA seq 1000 aa
MSDEERSEEEKPFAVERAKTGRAKCKKCKCPIERDAIRMAKLVANPFSDGKMKAWHHLSC
LFEVFAKQRASTKRIDDPEEDVSGWSELCDEDKATILRRIEEFENSSPFKTPKTKPAANR
SPPGSRKRKATDVAATTDNPSPEKKSKNAKRSSTSSDDASSSGKETSEKGRKRKKTTRDD
AFEEFQRVCRDIAKVDAYTDKTAVLRKMLVNGSEGDGFKSDVKLWCRMLLPGTAKRVYNL
QSKQLVKLFSRLLLHSENEMLEHLEKGDVAETIRTFFERSSALEPAPRSLLTIQEVDEFL
ERLSCLTKEDEQVHHFRSIVSRCTASDLRMIVRLIKHDLRINAGPKHILAAVHQDAYEAF
QTSRDLDSVVERCLRGSWKSDEPSSSSSSSLGPSSDVKIKLSLMTPVLPMLAEACKSVEM
AMKKCPNGMLAEVKYDGERVQVHKMGNVFRYYSRSLKPVLPHKVNLFKNYIPEAFPDGDD
LILDSEILMIDTTTGQPLPFGTLGVHKKAKFKDANACLFVFDCIYYNGDVLLHRSMMERR
RILSERMTEIPNRIMLSEVKEVHKSQDLAEMIARVLKMGLEGLVLKDIRSKYEPGKRHWL
KVKKDYLCDGAMADSADLVVLGAWYGTGNKGGIMSIFLMGCYDEDHDNWVTVTKVHTGHD
DATLAMLQDQLDMVKIGKDPSKVPSWLRANKPMIPDFVARDPKKQPVWEITGAEFTNQGV
HTADGISIRFPRVTRIRHDKDWSTATSLNNLRRLFKRSSESIDLGLLLPPSSEFSREDDD
EDDSPRLERKSKSPSKRNDGTKSIKKNSSPRKLFGKLKDSAKSDSTGRNNEEISLSGRER
AERAEFYAFVNGDYIEYTGAGIPLNWIEERKPMDGLPPDAKPLSNLTINELRSESVLKGA
TVSLAPGFENDRGKEIHRLLKTLGAKVLNDRERSASAYVVHSCAVIPSSVVREFEDVART
ARHVSVSWLEATASTSQAQPAEQHAVQLVADYCSCPCLHQ
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgtcggacgaggagaggagcgaggaggagaagccgttcgcggtggaacgggcgaagacc
ggacgcgccaagtgcaagaagtgcaagtgcccgatagaaagggacgccataaggatggcc
aagctggtcgcgaatcccttctccgacggcaagatgaaggcgtggcaccatctgagctgc
ctgttcgaagtgttcgccaagcagagggcctccaccaagaggatagacgaccccgaggaa
gacgtgagcggctggtcggaactctgcgacgaggacaaggccacgatccttcgtagaatc
gaggagtttgaaaattcgtctccgttcaagactccaaaaaccaagcctgcggcaaatcga
tcaccacccggctcgaggaaacggaaagcaaccgatgtcgcggctaccacggacaacccc
tcgccggagaaaaaatcgaaaaacgcgaagagaagctcgacgtcctccgacgacgcctcc
agctcgggaaaagagacctcggagaaggggcgaaaacggaagaagacgaccagagacgat
gcgttcgaagagtttcagcgggtctgccgggacattgccaaggtcgacgcctacaccgac
aagacggccgttttgaggaagatgttggtcaacggctccgaaggcgatggtttcaagagt
gacgtgaagctgtggtgcaggatgctgctacccgggacagcgaagagggtgtacaacctg
cagagcaagcagctggtcaagctgttctctcgtctgctgttgcacagcgagaacgagatg
ctggagcatctggagaagggggacgtcgccgaaaccatccggacgttcttcgagaggagc
tccgctctcgagccagccccgagaagcctgctcaccattcaggaggtggacgagtttctg
gagaggttgtcgtgtttgaccaaagaggacgagcaggtccaccactttcggtcgatcgtt
tctagatgcaccgccagcgacctgaggatgatcgtccggctgatcaagcacgatctgagg
ataaacgctggcccaaagcacattttagccgcggtgcaccaggacgcgtacgaggcgttt
caaacatccagggacttggacagcgtcgttgagcgatgcttgcgcggatcctggaaatcc
gacgaaccgtcctcgtcatcgtcctcgtcgctgggtccatcctccgacgtcaagatcaag
ctttcgctgatgacgcctgttttaccgatgttggcggaggcttgcaagtccgtggagatg
gcgatgaagaagtgcccgaacggaatgctggccgaggtgaagtacgacggggagcgagtt
caggtgcacaagatgggcaacgtgtttcgatattacagccgatcgttgaaaccggtgctt
cctcacaaagtgaacctgttcaagaattacatcccagaagcgttcccggacggcgacgat
ttgattctggactcggaaatcctcatgatcgacaccacgactggacagccgttgcccttt
ggtaccttgggcgttcacaagaaagctaaatttaaggacgccaatgcctgcttgtttgtt
ttcgattgcatctactacaacggagacgttttactgcacagatctatgatggaacggcga
cgaattttgtcggagaggatgacggagataccaaacaggataatgctctcggaagtcaag
gaagttcacaaatcccaagatttggccgagatgattgccagggttctcaaaatgggcctc
gagggcttggtcctcaaagacatccgcagcaaatacgagccgggtaaacgacattggctg
aaggtaaagaaggattatttgtgcgacggtgcaatggccgatagtgcagatctcgttgtg
cttggcgcatggtacggcacgggaaacaaaggcggtatcatgtctatattcctgatgggt
tgctacgacgaagatcacgacaattgggtaacggtgaccaaagtacacactggtcacgat
gacgcgactttagcgatgcttcaggaccagctcgacatggtaaagattggtaaagatccg
agcaaagtaccctcctggttgcgcgccaacaaaccaatgatccccgacttcgttgcaagg
gatccgaagaagcagccagtgtgggagataacaggcgccgagtttaccaatcaaggtgtt
cacacggctgatggtatcagcatcaggttcccgcgggtaacgcgcatccgtcacgacaag
gattggtccactgccaccagcttgaacaacctgcgacgccttttcaagcggagttccgag
tcgatagatctcggacttctcttgccaccgagctccgagttttctcgagaggatgacgac
gaggacgactcgccgaggctcgaaagaaaatcgaagtctccgtcgaagagaaacgacggt
accaagtcgatcaagaagaattcttctccgaggaaattgtttggaaagttgaaagacagt
gcgaaatccgactctaccggaaggaataacgaagagatcagtttgtctggcagagagcgc
gcggaaagggcggaattttatgctttcgtaaatggagattatatagagtacaccggtgcg
ggaattccactgaactggatcgaagaacgaaaaccaatggacggtctaccgccggatgca
aaaccgttgtctaatctgacgattaacgagctgaggtctgagagcgttttaaagggcgcg
acggttagcctggcgccgggattcgaaaacgacaggggaaaggagattcacaggctactc
aagactctcggagccaaggtgttgaacgatcgagagcgatctgcaagcgcgtacgtggtc
cactcttgcgcggtgataccatcgtccgttgttcgcgagttcgaggacgtggcgaggaca
gcgcggcacgtgagcgtctcctggctcgaggcgaccgcctccacctcgcaagctcagccg
gcggagcaacacgccgtacaactggtcgccgattactgctcttgcccatgtctgcatcaa
tga

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