Frieseomelitta varia: 122530755 Help Entry 122530755         CDS       T09482                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism fvi  Frieseomelitta varia Pathway fvi03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:fvi00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     122530755  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:fvi03021]     122530755    03019 Messenger RNA biogenesis [BR:fvi03019]     122530755 Transcription machinery [BR:fvi03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      122530755 Messenger RNA biogenesis [BR:fvi03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      122530755     U7-dependent histone pre-mRNA processing factors      122530755 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_2 UBA_Crd2 Motif Other DBs NCBI-GeneID:  122530755 NCBI-ProteinID:  XP_043513959 LinkDB All DBs Position Unknown AA seq 1111 aa AA seqDB search MDPRIHRRTEPEKGPGDLIVEWLNEASLSSEEDVKVANLCKVQEILINKEPQLLPLYLDE ALQFSLDRNAEVRKTITGFIEEAGVKQPEVIPRVVQTLLRLVSDESSAVAKRALRASGRI LRAALKWISSAITVTPEMEVAWNQLSALKVQIIDMIDSDNDGIRTQAVKFLEGVVLIQTY PDPDIPKKPDDFSLEDIPLTLKIARRRKLEEEANDVMDLLIKFHGSPHVSSVNLMTCMGS LALIAKTRPQFMPGVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLMKHPASIEFAP AIAKQLTQLGAKEQEIVKAYPKPEDIRRMKKRQQEAAASSAAKRVKIETSLIPDESEIVS SLVLTSKLPELVELSESFIAERLSVEIATDLVMDSMAWVPDTMTTIFQREYQPSSTTDIN IQRHTIAKLLATQIRQAKTKKKKDTKDEDAVMEDLVKNPTISVAEAKRERKREKDREKEK EAKASLEAHEKSLAKTRTRLKALKLSEVTKPLSKEIKEKMLLMAVNRILLSEKTAVFGGV AAIRSKILTTLAATFNPYIKEAVLRYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLCA KPQEAPHQAYNFLLCTLVSAIDLVQGKDRDTLLYRLYLEAPLITEDAVEALKVVSSDETR GLMPLQLLKEMVIRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRPELSKLIEE YAVLYLGFLRLHTPPEIVFGQDRGRPQVETQWTESTTRACLGLYLALLSEHQDLIHELAR VYTSMSADVKRMVLRLVEGPVRSLGMGSPQLLALVENCPKGAETLVTRIIHILTEKSAPS AELVARVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTHN NESGVPHTSPITPAELLIALHNIDPSKAELKTIIKATSLCFAEKQIYTQETVAVVMQHLM EMTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQPQS FAVILQLPPTQLAEALKMASNLRAPLLAHVEAFAENQKAHIPQSIMDVIQGKSLCDMHDE FDIAPPGDYPIEQKPDTMETDVSEPAPPGLD NT seq 3336 nt NT seq  +upstreamnt  +downstreamnt atggatcctcgaatacatagaagaacagagccggaaaagggaccgggtgatttgatagtt gaatggttgaatgaggcttcattaagctcggaggaagacgtgaaagttgcaaatttatgc aaagttcaagaaatattgataaacaaggaaccacaattacttccattatatttggatgaa gcgttgcagttctctttagatagaaatgcagaagttaggaaaacaattacaggtttcata gaagaagctggagtaaaacaaccagaggtaattccacgtgtagttcagacacttttacga ttagtttctgatgaatcatcagctgttgctaaaagagctcttagagctagtggtaggata ttaagagctgcattgaaatggatatctagtgccatcacagtcacgccagagatggaagta gcatggaaccaacttagcgctctcaaagttcaaattatagatatgattgacagcgataat gatggtattaggacgcaagctgtgaaatttcttgaaggtgttgttttgatacaaacgtat ccagatccagatattcctaaaaaaccagatgatttttctttagaagatattccattaaca ttgaaaatagcacgtagacggaaattagaggaagaagctaacgacgtgatggatttatta atcaaatttcacgggtctccacatgtcagtagcgttaatttaatgacatgtatgggatct ttagcactgattgctaaaacaagacctcagttcatgccgggtgtaatacaagctttgcag aggttacaacatgatctaccacccacattgtctgattctcaagtaactagtgttcagaaa caattaaaattaactctattagggttgatgaagcacccagctagcatagaatttgcacct gcaatagctaagcaattgactcaactaggagcgaaagaacaagagattgttaaagcttat ccaaaaccagaagatattcgacgtatgaagaaacggcaacaagaggctgctgcatcctcc gctgcaaagcgtgttaaaatcgaaacttccctaataccagatgaatcggaaattgtatcc agtttagtacttacctcaaaattaccagaattggttgaactttcagaaagtttcattgct gagagattaagtgtggaaattgctacagatttagtcatggatagcatggcatgggtccct gatacaatgacaacaatttttcaaagagaatatcaaccttcttcaacgaccgatataaat attcaacgacatacgattgctaaattactagcgacacagataaggcaagctaaaacaaag aagaaaaaagatactaaagatgaagatgctgtgatggaagatttagtgaaaaatccaacc atcagcgtagcggaagcgaaacgagagcgaaagcgtgaaaaagacagagagaaagagaaa gaggcaaaagcatctttagaggcacatgaaaaatcgctcgcaaaaacgagaactcgtttg aaagctttaaaattgtctgaagttacaaaaccattatcaaaagaaattaaagaaaaaatg ttactgatggctgtaaatcgaattttactttccgagaaaacagctgtatttggtggcgta gcagctataagatcaaaaattctgactaccctagctgcaacgtttaacccatacattaag gaagcagtattacgttatattactgacgatatgagaaatcgtttagacttagctttaggt tggttgtacgaagaatacgcattgcttcagggttttcaaagacgaactacattgtgtgcg aaaccccaggaagctccgcatcaagcgtacaattttttgttatgtactttagtatctgca atagatttagttcaaggcaaagaccgtgacacattgctatataggctttacttggaagct cctttaatcaccgaggatgcagttgaggccttgaaagtggtatcttcggacgaaactaga ggattgatgccgttacaattattaaaagaaatggttattcgtagaccaacaaaacaattg gttttcctgaatgtattattatgtcatactggtcatgaaaacaatacaataagggaagct gctatacaattagtttgtcaactatatagtcgtcccgaattaagcaaactcatagaagag tacgcagtactttatttaggttttttacgattacatacaccacctgagattgttttcgga caagatcgaggtagaccgcaagtggaaactcaatggacggagtcaactacaagagcttgc cttggattgtatcttgctctgttgagtgaacaccaagatttaattcacgaattggcgaga gtttatacatcgatgagtgccgatgtaaaacgtatggttcttcgactggtagaaggacct gtacgatctttaggaatgggcagtccacaattattggcattagttgaaaattgtcctaaa ggcgctgaaacactagttactagaattattcatatcctcacagaaaaatccgcgccgagt gcagaattagtagcaagggtgcgagaactttatcaaaccagagtttccgatgttcgattc ttaataccagtgttgaatggtttaacgaaaaaagaagttatagccgctcttccaaagctc ataaagttaaatcccattgttgttaaagaggtatttaatagactattgggcacccataat aatgaaagtggcgtacctcatacgtctcctatcacacctgctgaattgttaatagcttta cataatatagatccaagcaaagcagaattaaaaacgattataaaagctacgtctctatgt ttcgcggaaaaacagatatatacgcaagaaactgttgctgttgtgatgcaacatcttatg gagatgacaccgcttcctacattactcatgcgtacagtgatacaaagtttagcattatat cctaggttaagtggattcgttatgaatatacttcaacgattaattctcaagcaagtttgg aaacaaccaaaagtctgggagggttttgtaaaatgttgcgaacgtacgcaaccgcagagt ttcgcggttattttacaacttccgccaacacaattggccgaagcactaaaaatggcgagt aacttacgagcacccttattagcgcatgtcgaagcctttgccgaaaatcagaaagcgcac attccgcaatcaataatggacgtaatccagggtaaatcactttgcgacatgcatgatgaa tttgatattgcaccacccggtgattatccgatcgaacaaaaaccagatactatggaaact gatgtttcagaaccagctccgcctggcttagattag

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