Frieseomelitta varia: 122530766
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Entry
122530766 CDS
T09482
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvi03021
]
122530766
03036 Chromosome and associated proteins [BR:
fvi03036
]
122530766
Transcription machinery [BR:
fvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122530766
Chromosome and associated proteins [BR:
fvi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122530766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
Tex_YqgF
HHH_9
Spt6_S1
HTH_10
S1_RRP5
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
122530766
NCBI-ProteinID:
XP_043513975
LinkDB
All DBs
Position
Unknown
AA seq
1772 aa
AA seq
DB search
MADFLNSEAEESEEEKELDDNEKKKLKKIKAMEESEEEEEEDDEDRLREELKDLIDDNPI
DESEGEDSDASGGSKKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEADDDRDAIANELFEASGDEREIIMEDERRSERSHRPEADTFDEEGSEGEYTD
ADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEE
EEEEDEYMDDEDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPE
RMQLRTVPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIGK
IKKALDFMRNQQFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFE
KMRSYQLDEIMKNPDAPLPDNVRLIKDDDIERLKNVQTSEELNDVYHHFMLYYSHEIPAM
QEAARQKEKEARKEAKIQKRKQQMADAEENGEVALPEEEADVEEEEEADETLKQAVRTGP
YSICRRAGLDSLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLTIANEYCSQILNNSEE
VLKAAQLMVAIQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHPVYGMKYLKDK
PVRDLVGDQFLNLVIAEEDKLITITLSDSIKGNTSNNYVDEMKQLYYRDEFSKNVQDWNA
LRVGSVEMALTRIVLPSLKKELRANLIAEAKECVMRACCRKMYNWIKVAPYTCEFPEEED
EEWDTSKGLRVMSLAYVPDYSQAAFACLIAPDGECTDYLRLPHIMKRKNSYREDEKAMKE
ADLLAIRNFISTKKPHVVVIGGESREAMMIAADIKECIANLVEEEQYPNIQIEICDNELA
KIYSNSNKGVSEFRDYPELLRQAISLGRRMQDPLVEFSQLCTADEEILCLKYHGLQDQLP
KDELLDNLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQR
LENRTQLVTSCHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMA
VDALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNC
RYKDLRVPYQSPSAERLFDILTKETPETFYVGKLVLATVIGISHRKPQGDQLDQANPVRN
DETELWQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHV
ANPEERVSIGQIIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQKDPFYDTEAERRDA
KVEEDAKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTVT
WKVTDDVYQHIDVREEGKENAFSLGQSLWIGKEEFEDLDEIIARHVNPMAAYASELLDFK
YYKPAVEGIKDKAEDILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVS
PEGFRFRGQMFGRVNDLFRWFKEHFRDPVPGQSTPSTPRGAITSRAPYHATPGAVGGMNQ
EAIQRVAQNLPHHMLHSLSQVANQTSHHYPPHTPGTTSATGYGGVHTYPNTPYTPSGQTP
FMTPYQTPHHTPHHHGQPTPRYGQQTPNHQQGPFIHPPPPSGLNAAGHHRSTPSHRPTPP
MSTPGDPMDWKKAAEAWARLKSGPRMSTSTPRYEESRRTPRNYEESVGRTTPRNRTSNRT
PSYKSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttctgaattccgaggcggaagaaagcgaggaggaaaaggaattagacgat
aatgagaagaagaaactaaagaaaatcaaagctatggaggagagtgaggaagaggaggag
gaagacgacgaggatcgcttgagggaagagctcaaggatctcattgacgataatcccata
gacgaaagcgagggagaagacagtgacgcttctggaggatctaagaaacgcaagaaaagc
gacgacgaagatttcgacgatcgtttggaggatgaggactatgatttgatagaggaaaat
ttaggagtcaaagttgagaggaaacgtttcaaacgcctgcgcaggattcaagatgaagaa
tcggaagaggaacaggaaaaggaagcggacgatgatagagatgctattgcaaatgaactt
ttcgaagcttccggtgacgaaagggagattattatggaggatgaaagaagaagcgaacgt
agccacagacccgaggcagatacgttcgacgaagagggaagcgagggtgaatacacggac
gctgacgatttcatcgtcgacgacgacggtagaccgattgccgagaaacggaaaaagaaa
aagccaatcttctctgacgccgctttgcaagaggcgcaagacattttcggcgttgacttc
gattacgatgaatttggtaaatacggcgaggaggactacgaggaagaagaggaagaggaa
gaggaggaggaggatgaatacatggacgacgaggatgcggagaggccgcgacgaccgaag
aaacagttgaagaagaaaaccacgaggaagagcatcttcgaaatttacgagccaagcgag
ctgaaacgcggccacttcacggacatggacaatgaaatacgaaacacggacatacctgag
agaatgcagctgcgaactgtccccgtcacgccggttgcagaaggttccgacgagctggat
ttagaggcagagtggatttacaagcaggctttctgtcgaccgaccatttcgattcaggac
gcgcatttgaacgccgaggcgaaggaaagagcccggaaggggcctcagacgatcggcaaa
atcaaaaaggcgttggacttcatgcgaaatcagcaattcgaggtgcctttcatatcgttt
tatagaaaggagtacgtcttgccagagttgaacatcaacgatctttggaaggtgtacaag
ttcgacgccaagtggtgccagcttcgccagaggaaggagaatttactaaaactgttcgag
aaaatgagaagctatcagttggacgagattatgaagaatcccgatgcccctctgccggac
aacgtacgattgatcaaagacgacgacattgaacgattgaagaacgtgcaaaccagcgag
gagctgaacgacgtttatcatcacttcatgttgtactatagccacgagataccggcgatg
caagaggcagcccgccagaaggagaaagaagcgcggaaagaagcgaaaattcaaaagcga
aagcagcagatggcggacgccgaggagaacggcgaggtcgctctgcctgaagaggaagcg
gacgtggaggaagaggaggaggcggacgagacgttgaaacaggcagtgcgaaccggcccg
tactccatttgcaggcgagccggcctcgacagtctggcgaagaaattcggcctgactccc
gagcacttcgccgaaaatctgcgagataattaccagcggcacgaggtggaccaagagccg
acggaacctttgaccatcgccaacgaatactgcagccagatactcaacaattcggaggag
gtgctgaaagctgctcagttgatggtggccattcaattggcccgtgagccgttggtgagg
aagtgcgttcgtgaaatgtacatggagagagcaaagatatccgtgaagccaacgaaaaag
ggtatcaaagagatcgacgagaatcatccggtgtacgggatgaagtacttgaaggacaag
ccggtgcgagatctggtaggtgatcaattcctgaatttggtcatcgccgaggaggacaaa
ctgatcacgataacgttgagcgacagcatcaaagggaacaccagcaacaactacgtcgac
gagatgaagcagctttactatcgagacgagtttagcaagaacgtgcaggattggaacgcg
ttgagagtcggtagcgtggaaatggcgctcacgcgtatcgttctgccgagtttgaagaaa
gagctgagagcgaatctgatcgcggaggcgaaggaatgcgtcatgagggcgtgttgccgt
aaaatgtacaattggatcaaagtggccccgtacacctgcgagttccccgaggaggaggac
gaggaatgggacaccagcaaaggactgagagtaatgagcttggcttacgttccagattac
tcgcaagccgcgttcgcttgtctgattgcgccggatggggagtgtacagactacctgagg
ttgccgcacataatgaagaggaagaacagttaccgagaggacgagaaagcgatgaaggag
gccgacctgttggcgatccgaaatttcatatcgacgaagaagccacacgtggtggttatc
ggcggtgagtcgagagaggcaatgatgatcgccgctgacatcaaggaatgcatcgcgaac
ctggtggaggaggaacaatatccaaacattcagattgagatctgtgacaacgaattggca
aaaatctactcgaacagcaacaagggcgtgtccgagtttcgagattatccagaattgttg
cggcaggcgatctcgttgggcagaagaatgcaggacccattggtggagttttctcaattg
tgcaccgccgacgaggagatcttgtgcctcaagtatcacggcctgcaggatcagttgccg
aaggacgagctcctcgacaacttgtatctagagtttgtgaatcgggtgaacgaggtcggc
gtcgacgtgaacaaggcggtgcagcaagcttactgcgggaacttggttcagttcgtgtgc
ggcctggggccgaggaaggggcaggcgttgatcaaaatgttgaagcaaacgaatcaaagg
ttggagaacagaacgcagctggtcacatcctgtcacatggggccgaaggtcttcattaac
tgcgccggtttcatcaagatagacacaaacagcttgggagacagcaccgaggcgtacgtc
gaggtcctcgatgggtcccgggtgcatccggagacgtacgagtgggcgagaaaaatggcg
gtcgacgctctggagtacgacgacgaggatgccaatccagccggggcactcgaggagatc
ctcgagtccccggaaagattgaaagacctcgacctggacgcgttcgcggaggagctcgag
agacaaggtttcggcaacaaatgcgtcaccctgtacgatatcagagcggagttaaattgc
agatacaaagacttacgcgtgccgtatcagtcgccgagcgcggaaaggttgttcgatatt
ctgacgaaggaaacgccggagacgttttacgttgggaagctagttctggccacggtgatc
gggataagtcacagaaagccgcagggtgatcagctggaccaagcgaatcccgtgagaaac
gacgagacggaattgtggcaatgcccgttctgtttgaaaaatgatttcccagagttgtcc
gaagtatggaatcatttcgacgccggagcttgccccggcaaagctactggcgtgagattg
agattagacaatgggatatctggttatattcacataaaaaatttatccgacagacacgtt
gcgaatcctgaagagagggtgagcatagggcaaataatacattgtcggataataaagatt
gaagtggaacgattcagcgtcgagtgtacgagcaaaagtagcgaccttgcggataagaat
cacgaatggaggccacagaaagatccgttttatgacacggaggcagaacggagggacgcg
aaagtcgaagaggacgcgaagaaagccaagcaacgacagacgtatgtaaaacgggtgatc
gtgcatccctctttccacaacatcagtttcgcagaagccgagaagttgatgcagactatg
aagcaaggagaagcgatagtcagaccgagcagtaaaggcgctgatcacctaacggtcacg
tggaaagtcaccgatgatgtttatcagcacatcgacgtgagggaggagggaaaggaaaat
gcgttctccctcggtcaaagtttgtggatcgggaaggaagaattcgaggacttggatgaa
attattgcgaggcacgttaaccctatggccgcgtatgcttccgaattgttagactttaag
tattacaaaccggctgtagaaggcatcaaagataaagcggaagacatattgaaggaacaa
aagaaggagaacccgggagggattccgtatataatatctgccgcaaagaattaccctggc
aagtttttgctgtcttatcttccacgaactcgatgccgtcacgaatacgtgacggtatcg
ccagaaggattcagattcagagggcaaatgttcggtagagtgaacgatctcttccgatgg
ttcaaggaacactttcgagatccagtacctggtcagtctactcccagtactccgcgtggc
gcgataacatctagagcaccttaccacgcaacgccgggtgcagtgggtggaatgaatcaa
gaagccatacagagagtggcgcaaaatcttcctcatcacatgttacattctttgtcgcaa
gtggcgaatcaaacttcgcatcattatccgccgcacacgccaggtaccacgagtgccacc
ggctatggtggtgttcatacgtatcccaatactccgtacacaccttctggacagacaccc
ttcatgacaccgtatcaaacaccgcatcacactccgcatcatcatggtcagccaactcca
agatacgggcagcaaacacccaatcatcagcaaggtcctttcattcatccgcctcctcct
tcggggttaaatgccgctggacatcacagatcaacgccgtcacacaggcctacacctcca
atgtcaacacctggcgatcctatggattggaagaaagcagcggaagcatgggcgcgatta
aaaagcggtccacgtatgtctacttctactccgaggtacgaagagtctagaagaactccg
cgaaactacgaagaatcagttggaaggacaacaccgcgaaatagaacttcaaatcggaca
ccttcttacaaatctcctcgaggtacaccgcacaccaattctagtcctcgaagtatgtcc
cttagcggagacggtactcctttgtacgatgaaagttaa
DBGET
integrated database retrieval system
