Frieseomelitta varia: 122531511
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Entry
122531511 CDS
T09482
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fvi01009
]
122531511
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122531511
04131 Membrane trafficking [BR:
fvi04131
]
122531511
03036 Chromosome and associated proteins [BR:
fvi03036
]
122531511
Enzymes [BR:
fvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122531511
Protein phosphatases and associated proteins [BR:
fvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122531511
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122531511
Membrane trafficking [BR:
fvi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122531511
Chromosome and associated proteins [BR:
fvi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122531511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
122531511
NCBI-ProteinID:
XP_043515435
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MSDSMTCKNLLTAVKQLADSEIELIKTIKDSEKINTKNIKNTMSVTDKERPKKSAKPFNV
RPSAALLAAKREAAQQRILQEKKSNNIFVHDIYQKAIDAYNTKRMETGIVFDNSMTEHKC
LWDPNYPECPARLTKILQRCEELGLISRCKLITPRQASEDEILMKHSQEQIDILKATDKC
TDIDTLELLSSKYDAIYIHPSTYQLSLLAVGSTINLVESICKGEIQNGMAIIRPPGHHAM
KSEYCGYCFFNNVAIAAEKVLSSNLASKILIVDWDVHHGQATQQMFYNDPRVIYFSIHRY
ENGEFWPNLRESNFHFVGDDLGEGYTFNVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDF
IIVSAGYDAALGCPEGEMLLTPACYAHLLSSLLSLASGKVAVILEGGYCLKSLAESAALT
LRTLLGDPCPMLETLTLPSISIRDTILNAIYAHKPYWKCYQYQDTYSINSTTNNKEENTD
QYLPIVTFKGTDIKPEIYETRNCYPIQNKDVIEMIEKQLNTLIQFTNLSKAPNKVCIVYD
DRMLKHCDMSDDNHPEKPDRINFIYKKYQEYNLLDRCYVQEGRSATREELMLVHSKEYID
KIKDTETLKPKDLQKQAKTYNSVYLHPETWTSACVSTGSLLQVVHSVLIGESQSGVAIVR
PPGHHAGENIACGFCIFNNIAVATRYAIEFHHVKRVLIIDWDVHHGNGTQSIFEEDSKVL
YISVHRYDNGSFFPNSKRANYSYVGSQSGEGFTVNIPWNKKGMGDAEYIAAFQQIVMPIA
YQFNPELILVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGRVILSLEGGYNTNSI
AHAMAICTKSLLGDPLPMLENGHIPCISAIHTINNVIKTQKQYWPNLAFNLSLPKERVLP
KPKIPHIKTNERVINNEELLKHSESKIALEEIETEKMRRRPITRQIINKKCNTDWQAVSE
ELKELEKKILIPSYKQQTINTHDEVSNYTKKCTNPDEKGHSDENFTNSAAGSSGEQNENA
RAQTSNSKSLQDYFSENLHSLIAGDMFAVIPLRDCPHLNSVKDVPVSGIDIRTPCIDCNS
NIENWVCLQCYSVHCARNINQHGLIHAEKMEHPLALSFSDLSVWCYKCEAYIDNPQLFAA
RNAVHQSKFNEELPWTYNDN
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattctatgacatgcaaaaatttactcactgctgttaaacaattggcagacagt
gaaattgagttaataaaaacaataaaggattcagaaaagataaacactaaaaatattaaa
aatacaatgtctgtaacagataaagagaggcctaaaaaatctgcaaaaccgtttaatgtt
cgtccatctgctgctttattagcagctaaacgagaagcagctcaacaacgtatattgcaa
gaaaaaaaatcgaacaatatttttgtacatgatatatatcaaaaagctattgatgcgtat
aacacaaagagaatggaaactggcattgtatttgataattcaatgacagaacataaatgc
ctttgggatccaaattatccagaatgtcctgctagattgacaaaaattttgcaaagatgc
gaggagctaggtttaataagtagatgtaaattaatcacaccaagacaagcttcagaggat
gaaatacttatgaagcacagccaagaacagatagatattttgaaagccactgacaaatgt
acagatatagatactttagaattattatcatcgaaatatgatgccatttatatacatcct
tctacctatcaattgtctttgttagctgtgggttctacaataaatttagtggaaagcatt
tgtaaaggagaaattcaaaatggtatggccattataagaccaccaggacatcatgcaatg
aaatcagaatattgtggatattgtttctttaataatgttgctattgctgctgaaaaagtt
ttaagtagcaatttagctagtaaaattttaattgttgattgggatgtgcatcatggacaa
gctactcagcaaatgttttataatgatccacgagtaatttatttttcaattcatcgttat
gaaaatggtgaattttggccaaatcttagagaatctaattttcattttgttggagatgat
ttaggtgaagggtacacttttaacgtgccacttaataaaactggtatgaccaatgctgat
tatttagccatatttcaacaggttttattgccaatggcctatgagtttcaaccagatttt
ataatagtatcagctggttatgatgcagctttgggctgtccagagggtgaaatgttgcta
acacctgcatgttatgctcatttactatcatcattattgagtttggcctccggaaaagtt
gctgttatattagagggtggttattgtttaaaatcattagcagaaagtgcagcattaaca
ttacgtactttgttaggtgatccatgtcctatgttagaaactcttaccttaccatcaata
agtatacgtgatacaattttaaatgcaatttatgcgcataaaccatattggaaatgctat
cagtatcaagatacatacagtattaatagtacaacaaataataaagaagaaaatactgat
caatatttacctatagttacattcaaaggaactgatattaagcctgagatatatgaaact
cgaaattgttacccaattcaaaataaagatgttatagaaatgatagaaaagcagttaaat
acattaatacagttcactaacttgtctaaagcaccaaacaaggtatgcattgtttacgat
gatagaatgttaaaacattgtgatatgtcagatgataatcatccagaaaaaccagatcgt
attaattttatttataaaaaatatcaagagtacaatttacttgatcggtgttatgtgcaa
gagggacgaagtgcaacacgagaagaattaatgttagttcattcaaaagaatatatcgat
aaaataaaagatacagaaactttaaaaccaaaggatttacaaaagcaggcaaaaacttat
aattcagtttatttgcaccctgaaacctggacaagtgcctgtgtatcaactggatcgtta
ttacaagtagttcatagtgtattaattggagaaagtcagtctggtgttgctattgttagg
cctccaggacatcatgctggggagaatatagcatgtggtttttgtatttttaataatatt
gctgtagcaactagatatgctatagaatttcatcatgtaaaacgagtattgataatagat
tgggatgtacatcatggtaatggaactcaatccatttttgaggaagactccaaagtttta
tatatatctgttcatcgttacgataatggcagtttttttccaaattctaaacgagcaaac
tactcttacgttggttctcaatcaggagaaggttttactgttaatataccatggaataag
aaaggaatgggtgatgcagaatatatagcagcatttcaacaaatagtaatgccgattgct
tatcagtttaacccagaattaattttagtttctgcgggttttgatgcatgtattggtgat
cctctaggaggctgctttgtaacaccagaaatgtatgggcacttaacacactggttatct
tctttagccaatggtcgtgttattcttagtcttgaaggaggttataatactaattcaatc
gcgcatgcaatggctatttgtacgaaatccttgcttggtgatcctttaccgatgttagaa
aatggacatattccatgtataagcgctattcacactataaataatgttataaaaacacaa
aaacaatactggccaaatttagcatttaatttatctttaccaaaagaaagagtacttcct
aagcctaaaattccacatataaagacaaatgaacgcgttataaacaatgaagaactttta
aaacattcagaatctaagatagcgctggaagaaatagaaactgaaaaaatgcggagaaga
cctataactcggcagataataaataaaaaatgtaacacagactggcaagccgtttctgaa
gaattgaaggaattagaaaagaagattcttattccatcttataagcaacaaacgattaat
actcatgacgaagtttctaactatacaaaaaaatgcacaaatccagatgaaaaaggacat
tctgatgaaaactttaccaattctgctgctggaagtagtggtgagcagaatgaaaatgca
agggcacaaacgagtaatagtaaaagtttacaggattatttttcagaaaatttgcattca
ttaatagctggagacatgtttgcggtgataccattgcgagattgtccacatttgaatagc
gttaaggatgtaccagtttcaggaattgatatacgtacaccatgtatagactgcaacagc
aacattgaaaactgggtttgtttacaatgctatagtgttcattgtgctcgtaatattaat
caacatggtttaatacatgctgaaaaaatggaacatccattggctctaagttttagtgat
ttatcagtttggtgctacaaatgtgaagcatatatagataatccgcaattatttgccgca
cgtaatgctgtacatcaaagtaaatttaatgaggaattaccatggacgtataacgacaat
tga
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