Frieseomelitta varia: 122531614
Help
Entry
122531614 CDS
T09482
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvi03041
]
122531614
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122531614
Spliceosome [BR:
fvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122531614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
Ank
nSTAND3
HA2_N
ATPase
AAA_22
AAA_19
Ank_5
Cas_TM1802
TrwB_AAD_bind
NACHT
Motif
Other DBs
NCBI-GeneID:
122531614
NCBI-ProteinID:
XP_043515599
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MPRRNRHKKTPLIGEDTRIAVNLTLKKLLQTPDQKELEFPSSYTAEERAYIHKLAYELGL
KSKSRGKGTNRFLTVYKREGSTIVQADAVIKLQKASKQSISNLLQAFPINHKECQDLLPP
IERERPPNTDVSVNTNTKAMGRLNNSVPQIPQLKTNFDVLNYRKALPIFNFRDDILDALS
VNQVIVIGGETGSGKTTQVPQFILDQCQQRQQPCRIICTQPRRLSAISVAERVAFERDEK
VGQTFGYQIRLESRVAPKTLVTYCTNGVLLRTLMANDSILSTVTHVIVDEVHERDRFCDF
LLIALKDALQKHKSLKLILMSATLDVSIFVKYFNKCGVINVLGRSYDVDVYFLEDVLKMT
GYMTKEMLAKRKEFINKKDQYKILETWTQYKPQQSGSNTMNERCILSAPILAQQNEPVPE
KIKLEPWLVEEMDKSISDAWLRGGEDNFAQLLYFILSENVSVDYQHSITFVTPLMVAAGK
GCINTTEQLLNLGANLNLRAANEWTALDWARNMNQTECAELIEAYMKTYDCTLQDETKVH
AKDISLSEEDKFLLDVYQHTFNDDKINYDLLLQLILYVHLKMPPGSVLIFLPGYDDIVTM
REKINNEEKEMNKGLRYNLYMLHSYMQICDQKKVFKPSPVGSRKIILSTNIAETSITIDD
VVYVIDSGKVKEKSFDALSGVCTLKSNWISQACAKQRKGRAGRCRKGICYRLFSSIRYNS
MEPYQTPEILRSPLQELCLYTKHLAPGNTPIAEFLDRALEPPSNVITRNAVQLLKTIDAL
DPWEDLTEIGSHLLDLPIEPRLGKMLLYAVVLKCLDPVLTIVCSLAYKDPFILPLQPSQK
RAAIAARKRFATNTYSDHMAVLRAFQGWQNARASGKERIFCEQNFISAAVMEMVVGMRTQ
ILGQLRASGFIRARAPGDIRDLNSNSENWAVVKAALTAGLYPNVIRVDREHLQLRTQKEV
KVFFHPSSTLRDYPKSPRTTFTQTYSANVEALPCDWLLYEEMSRTGRFCHVRMVTLVNPL
TVALFCGPARLSVDVIYEAESVPESESDSEVDESNEGTIFKLDDWVVFKLDPETVRLFLY
LRQKWNALFLRRMKTPNKTMSQLDEKVVSVLVSVITNEEQACGLQQPSGIGQRPRPLIVD
YYPINVRRTDDFVERNF
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcagaaatcgtcataagaaaactcctcttattggagaggataccagaattgca
gtaaatttaacattaaagaaattattacaaacgcctgatcaaaaagaattagaatttcca
tcttcatatactgcagaagaaagagcctacattcataaattagcatatgaacttggatta
aagtctaaaagtagaggtaaaggtacaaatcgttttttaaccgtgtataaaagagaagga
tcaactattgttcaagctgatgctgtaataaaattacaaaaagcatcaaaacagagtatc
tctaatctgttacaagcttttccaattaatcataaggaatgtcaagatttattaccacca
attgaacgagaacggcctcctaatacagatgtttcagtgaatacaaatacaaaagcaatg
ggtagattaaacaacagtgtgcctcaaataccacaactaaaaactaattttgatgtattg
aactatcgcaaagctctcccaatttttaattttagggatgatattcttgatgcgttaagt
gttaatcaagtgatcgtaataggaggtgagacaggtagtggtaaaactactcaggtccca
caatttattcttgatcagtgccagcaaagacaacaaccatgtagaattatttgcactcaa
ccaagaagactgtcagctatttcagtagctgaaagagtagcatttgagagagatgaaaaa
gttggtcaaacgtttggttatcaaataaggcttgaaagtagagttgctccaaaaactctt
gtaacatattgcacaaatggtgtacttcttagaactcttatggcaaatgattcaattcta
agtactgtcacgcatgttattgtagacgaagttcacgaacgtgatagattttgcgacttt
cttttaatagcattaaaagatgcgttgcaaaaacataagtctcttaagcttattcttatg
agtgccacgttggatgtaagcatttttgtgaaatattttaacaaatgtggagttataaat
gtcttaggcagatcatatgatgtcgacgtgtattttcttgaagatgttttaaaaatgact
ggttacatgacgaaagaaatgcttgcaaagaggaaagaatttataaataaaaaagatcaa
tataaaattttagaaacttggactcaatataaacctcaacagtcaggatcaaatactatg
aatgaaagatgtatattatctgcaccaattttagcacaacagaatgaaccagttcctgaa
aaaataaaattagagccgtggttagttgaagaaatggataaaagtatctctgacgcatgg
ttacgcggcggcgaagacaattttgcacaacttttatatttcatactttccgaaaatgtt
tcggtagattatcaacattccataacatttgtaactccgcttatggtcgccgcaggtaaa
ggatgtataaataccacagaacagcttttaaatttaggcgcaaatttaaatttgcgagca
gcaaatgaatggactgcattagattgggcaagaaatatgaatcaaacggaatgtgctgag
ttaatagaagcatatatgaaaacttacgattgtacattgcaggatgaaaccaaagtacat
gctaaagatatttcactttcagaggaagataaatttttattagatgtgtatcaacatacg
tttaacgatgacaaaattaattatgaccttcttttacaattaattttgtatgtccattta
aagatgccgcctggttctgttttaatatttttgccggggtatgatgatattgtaactatg
agagaaaagataaataacgaggaaaaagaaatgaataagggtttgcgctataatttatat
atgcttcattcatacatgcaaatatgtgatcagaaaaaagtatttaaaccaagtcctgtg
ggatctcgaaaaattattctttcaacaaatatagctgaaacaagtattacaattgatgat
gttgtatatgttattgattcaggaaaggttaaagaaaaatcgttcgatgccttatcggga
gtatgtacacttaagtctaattggatttctcaagcttgtgcaaaacaacgtaaaggtaga
gcaggtagatgtaggaagggcatttgttatcggctgttctcgtcaattcgatataatagt
atggagccttatcaaactccagagatcttaagatcaccactgcaagaattatgtttatat
acaaaacatttagctcctggaaatacacccattgcagaattcttagatcgggcactggaa
ccaccttccaatgttataacgagaaatgcagttcaattattgaaaactatcgatgcatta
gacccatgggaagatctcactgaaataggaagtcatttgcttgacttaccaattgaacca
cgacttgggaaaatgttattgtatgctgttgttttgaaatgcttagatccagtcttaact
attgtatgtagtttagcatacaaagatccctttatattaccgttacaaccatcacaaaag
agagctgcaattgcagcacgtaagagatttgcgaccaatacatattccgatcatatggca
gttttacgtgcttttcaaggttggcagaatgcacgtgcaagtggcaaagaacgcatattt
tgtgaacaaaattttatttcggctgctgtgatggaaatggttgttggaatgcgtacacaa
attcttggtcaactacgtgcatctggattcattagagcaagagcaccaggagatattaga
gatctaaattctaattctgaaaactgggcagtagtaaaagcagctctgactgctggttta
tatccaaatgtaataagagtagacagagaacatttgcaattaaggacacaaaaagaagtg
aaagtatttttccatccatcatcaactttaagagattatcccaagtcaccaagaacgaca
tttacacaaacatattcagctaatgtggaagctttaccctgtgattggttactctatgaa
gaaatgagtcgtacaggacgattttgtcatgttagaatggtcacattggttaatccatta
acagtggcattgttctgtggaccagcaagattgtctgtagatgtaatctatgaagctgaa
tctgtaccagagagtgagtcagattctgaggttgatgaaagtaatgaaggaacgattttt
aaacttgacgattgggtagtatttaaacttgatccagaaactgtcagactttttttatat
ttaagacaaaaatggaatgctctgtttttgagacgtatgaaaactccaaataaaacaatg
tcgcaacttgatgagaaggtggtcagtgtcttagttagtgtcattacaaatgaagaacag
gcatgtggattacaacaaccgtctggtattggccaaagaccgcgaccattgattgttgac
tattaccctataaatgttaggagaacagatgactttgtagagaggaatttttaa
DBGET
integrated database retrieval system
