Frieseomelitta varia: 122531796
Help
Entry
122531796 CDS
T09482
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
fvi
Frieseomelitta varia
Pathway
fvi04137
Mitophagy - animal
fvi04140
Autophagy - animal
fvi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122531796
04137 Mitophagy - animal
122531796
04148 Efferocytosis
122531796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fvi03000
]
122531796
Transcription factors [BR:
fvi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122531796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS
PAS_11
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
122531796
NCBI-ProteinID:
XP_043515934
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MIAPRVQPIGTLPDDEPGRCSSWIARQPGHANFYDDDRPTLPSCRFARAQIQQSLPVSDY
RSLNPCAERSYDDRRGDPTFESLPYQASLPCAEPSASIEQLQSQLQPPQCSQFRDCAQNL
VHGGGKSCQLGPIDVEDLALYFEPDKPPSINCPPRVYRPSSSSSDSSNFRRAKSTRYGPY
PSLASGCKPLERSGFSSSDELLLPSVNWLDEREFCDDCPQPFAFCTEERWLQCPASDRCP
LYDTAYTHGQNVLPPCLLEDLRNECRFRYGCDEDEQLLEDYLSNEKRKEKSRDAARCRRS
KETDIFTELAAALPVPPEQAAHLDKASVMRLAIAYLKVRSVVDSIPGTVAKSETLNQMDE
LFSKALNGFMLVLSSDGNMIYLSENVSDYLGVSQMDMMGQSVYEYSHPCDHEELRECLSS
KPPENNDKRTCSFFLRLKCTLTSKGRKVNLKSASYKVIHCTGRLTYIRDPASSRSENEAN
EDAEQKSDDEENERDTGASLVLLGCPIPHPSNIEIPLGRHTFLSKHSLSMKFTYADEKLA
EYLGWDSEELVGQSVFEFHHALDNLALDKSFKSLFSKGQCETVAYRFLGKRGGYAWVVTQ
ATLIHCTKQQKPLSVVCVNYILR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgccacgtgtccagccgatcggtacgctgcccgacgatgagcccggtcgttgc
tccagctggattgccagacagccgggccatgcaaacttttatgacgacgatcgacccact
ctaccgtcttgccgattcgctcgtgcacagatccaacaatcccttccagtcagcgactat
cgctcgcttaatccctgcgcggagagatcttacgacgatcgacgcggggatccgacgttc
gagtcgcttccttatcaagcttccctgccgtgcgcggaaccgtcggcctctatcgagcaa
ttgcaatctcaattgcagccgccgcagtgtagccagtttcgtgactgtgcgcaaaatctg
gtgcacgggggcggcaagagctgccagctgggcccgattgacgtcgaggatctagctctg
tacttcgagcccgacaaaccgccctcgatcaattgccctccgcgtgtctatcggccatcg
tcgtcgtcgtccgactcgtccaactttcgtcgagcaaagtcgacgaggtacggtccctat
ccaagtttggccagcggctgcaaaccactcgagcgatctggattttcgtccagcgacgag
cttctgttgcccagcgtgaattggctcgacgagcgtgaattctgcgacgattgtcctcaa
ccgttcgcattttgcaccgaggaacgatggctccagtgtccggcgagcgaccgttgccct
ctgtacgacaccgcctacacccatggacaaaacgtcctgccaccgtgcctgctcgaggac
ctgcgaaacgagtgtcggttccgatacggatgcgacgaggacgagcagctactcgaagat
tatttgagcaacgagaagaggaaggagaagtcacgggacgctgcacgatgccgtcgaagc
aaggagacggacattttcacggagttggctgccgctcttccggtgccaccggaacaggca
gctcatttagataaggccagtgtcatgagactagcaatcgcctatctcaaagttcgttcc
gtggtcgattccattccaggaacggtggccaagtccgaaacgttgaatcagatggacgag
ttattttccaaagctctgaacgggttcatgttggtattgtccagcgatggaaacatgatc
tacctttcggagaatgtcagcgattatctcggtgtctctcagatggacatgatgggtcag
agcgtgtacgagtatagtcacccgtgcgaccacgaggagctgcgggaatgcctgtcctcg
aagccgcccgagaacaacgacaaacgcacgtgcagtttcttcctgcggcttaagtgcacg
ttgaccagcaaaggaaggaaggtcaatctgaaaagcgcttcgtacaaggtgattcattgt
accggtaggttgacatacatccgcgatccagcgtcgagtcgatcggagaacgaggcgaac
gaggacgcggagcagaaaagcgacgacgaggagaacgaacgtgacaccggcgcctcgttg
gtgctgcttggatgtcccataccgcatcccagcaacatagagatacctttgggacgtcac
acgttcctctcgaagcacagcctcagcatgaagttcacgtacgccgacgagaagttggcc
gagtatctgggctgggacagcgaggagctagttggacaatccgttttcgagtttcatcac
gccctcgataatttggctctggacaagtctttcaagtcgttgttcagcaagggacagtgc
gagacagtggcgtacagattccttgggaagcgaggcggttacgcgtgggtcgtgacacag
gcgaccctgatccactgcacgaaacagcagaaaccactgtcggtcgtctgcgtgaattac
attctaaggtag
DBGET
integrated database retrieval system
