Frieseomelitta varia: 122532205
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Entry
122532205 CDS
T09482
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
fvi
Frieseomelitta varia
Pathway
fvi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122532205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fvi03036
]
122532205
Chromosome and associated proteins [BR:
fvi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122532205
REST complex
122532205
Heterochromatin formation proteins
Other heterochromatin formation proteins
122532205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
122532205
NCBI-ProteinID:
XP_043516698
LinkDB
All DBs
Position
Unknown
AA seq
1541 aa
AA seq
DB search
MKRVRGLDEVASPAAATLKHSSVSAGSGGGGGLEYHSSSGIGVVVPGQAVRSVASKEMPG
SIQFGTAQAQQQYTGAIVVPTAAPSPIKGSGSAGLTSTCSSSSVNAAGGLHAGIGGGSNH
NMGSQQPTPGTQSQVHSQQQPTIRHKVHSTNVTPLASTPPGTSLGGGSGSQQFQRLKVED
ALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFNTF
LPPGYKIEVQANEQGYAFQVSVSMPSPTATHTCTSLSQHHCTVNVGSPPVASPPTQPAKA
PPPVLQIMPGPGNIHHSLANNISNNSLAVHAPSPPPVQAYNNSHVSAAQAQAVSQALSQA
QDGIPTSGQAQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESG
HMGSTSGSGASGGAKHLTEAEVYSQVAKLFENQDDLLAEFGQFLPDATNQQSSLSNKTAT
VNDHTTIVKKPLGPKAPYNNSGNISRDLRESSGTSTIERESRDHRDRERERDRSGIRDIN
SLQKLGHNTGQLKRSPSFSPSVTAGNSHHIQHGPPLKKPKVSSMRECVTIAEAGKYGSLN
DYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPELLRWFKDFL
GHLPESSNANATNASSNLNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGASYCALPK
SYVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELDGVI
ETNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADIIDG
LKKNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQNDVKA
LRSKSLFNEIETLYDERHEQVDDGSGDGQNNTGPHLVLPYKDKSVLDDAANLLIHHVKRQ
TAIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDLNVAACSNSQSVTMNTS
SLGGGLQANRNKAPVSPIPSSTSIKIEPDIKVPIHAMSNDPEEAYTLFMGSNNWYLFLRL
HHILCERLTKMYDRAVALAEEESRYKQQRKESTAVALRLKPKNEIEIEDYYPAFLDMVKN
VLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDPICQQCMELFQREQ
RQPKETSGAGGLCATAYMRLGAEMSYQRKAEKAMADENCFKVYIYKKDCKMTMELLDTEG
DEAMDNSCREREREGVTVSEKWSTYVERFSAPAGQTSPKDTPTLTDNEPTTNHPVSNDQA
ARGGRGRKRKNTDISKKMEGNGWSSLGRILAGRKPVFLYRNVRQWRKRAARIMSASMANT
NHPEKAAESTDKEKSLDSVDALLKRPPGLRLADTGDTSDIINSDETQCRFNPNSYQMLYI
ASKEAFLYKQHSISRARECHPNVTKHLNSKFHQWLAAWASKNVADVQHRLCQDWLMGRYE
NLIPHKTRVITDNDQTRSPYRQYNRYRVERLQSDLLTEPCV
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcgcgggctggacgaggtagcatcaccagcagcagcaacattaaagcac
tcgtcggtgagtgcaggaagtggcggaggaggtggtttggagtaccattcaagcagtgga
ataggcgttgttgtacctggccaagcagttcgatcagttgcttcgaaagaaatgccggga
agcatacaatttggaactgcccaagctcaacagcaatatactggagcaattgtagtgccg
accgcggctccgtcccccattaagggaagtggatctgcaggacttacttctacatgtagc
agtagcagtgtaaatgctgctggaggtttacatgctggaataggtggtggtagtaaccac
aatatgggttcccaacagcctacacctggaacacaaagtcaggttcatagccaacagcag
ccaacgataaggcataaggttcattctaccaatgtaacaccattagcttctaccccacca
ggtacaagcctaggtggtggtagtggatcccaacaatttcagagattaaaggtcgaagat
gcattatcttatttagatcaagtaaagtacaaatttagcgatcagcctcaggtgtataat
gattttttggatattatgaaagaatttaagtctcaaagtatagatacaccaggagtcata
acaagagtcagccatttgtttaaaggacatcctgagcttattgttggtttcaatacattt
cttccacctggatacaaaatagaagtgcaagcaaatgagcaaggttatgcatttcaagtg
tcagttagtatgccaagtccgacagcaacacatacttgcactagcttgtcacaacatcat
tgcactgtgaatgttggttcaccccctgttgcaagtccaccaacacaaccagcgaaagct
cctcctccagttttgcagataatgccaggtcctgggaacatacaccattcgttggcaaat
aatatttcgaataacagtttggcagtacatgcaccctcaccaccaccagtacaggcatac
aataattcacatgttagtgcagctcaagcgcaggctgtgagtcaagcgttaagtcaagcg
caagatggtataccgaccagtgggcaagctcaacagagccaaccagttgagtttaaccat
gcgattaattacgttaataaaattaagaatcgattccaaggtcaaccggacaagtataaa
agatttttagaaattctacacacttatcagaaagaacagcgaaatctaaaagaatctgga
catatgggtagcacaagcggatctggtgcatctggtggtgcgaaacacctaacggaagca
gaagtttacagtcaggttgctaaactattcgaaaatcaagatgatctgctggctgagttt
ggacaatttttgccggatgccactaatcaacaaagttcgttgagtaacaagactgctacg
gttaatgatcacacaacaattgttaaaaaaccattgggacctaaagcaccttataataat
tcgggaaatatttcgagagatctccgagaatcgagcggtactagtacaatagagcgcgaa
agtcgcgatcatagagatcgtgaacgggagcgagatagatctggtatacgagatattaat
agtttacaaaaacttggtcacaatacgggacaattgaagagaagtccgtcattttcccct
tccgtaacggctggaaattcccatcatatacagcatggaccacctcttaaaaagcctaaa
gtatcatctatgcgtgaatgtgttacaatagcggaagctggaaaatatggcagtctcaat
gattatgctttctttgacaaggttcgtaaagcgctgaggtcgcaagaagtatacgagaac
tttctcagatgtttagttctatttaatcaagaaatagtatctaaatctgagttagtgcag
ttagtaacgccatttcttggtcgttttcctgaacttttgcggtggtttaaagattttttg
ggccacttgcctgagtcttctaatgccaacgcaacaaatgcaagtagcaatttaaatgtt
gaggcgctaccaaataatgtggtacgaagtcatcaagaaagaccgcaaggtgatctggca
atggagattgactatacagcgtgcaaacgtctaggggcatcatactgtgcgttaccaaag
tcttacgttcaaccaaagtgtacaggaagaacgcagttgtgtaaggaagttctcaatgac
acgtgggtttcatttccaacttggtcagaagatagtacattcgtaacatccaggaaaact
cagtacgaggaatttatttaccgctgtgaggatgaacgatttgagctggatggcgtaata
gaaactaatgcgtcaacgatccgagttctcgaaggtgtccataagaaaatgagtagaatg
agtcaagaagaacttcaaaaattcaaactcgacgattgtcttggtggctgttcccctaca
attcatcagagagctttgaaaaggatatacggtgataaggcggccgacattattgatggc
cttaagaaaaatcctgtggtagctgtaccggtagttcttcgtcgactaaagagtaaggaa
gaagaatggcgggaggcgcaaaaaggtttcaataaaatctggagagaacagaacgaaaag
tattacttaaagtctctggatcatcaaggtattaatttcaagcaaaatgatgtgaaggct
ctaaggtcaaagagcctatttaacgaaattgaaacattatatgatgagagacatgagcaa
gtagacgatggcagcggagatggccaaaacaataccggtccacatcttgtattaccttac
aaagataaatctgtcctagacgatgcagctaatcttcttatccatcatgtaaaacgtcaa
acggccatccataaggaagacaagcaacgaataaaacttttgttgaagcattttatacct
gatcttttcttccatccacgccaagaactaagtgatgacgaaagagatgaagatgatgaa
aaggaggacctcaatgtagcagcgtgtagtaattctcagtcagtaacgatgaatacctca
tcattgggtggtggcctccaagcgaataggaacaaggcaccggtatctccgattccgtct
tccacgtcgattaaaattgaacctgatatcaaagtaccaattcatgccatgtcgaacgat
cctgaagaagcgtatacgctcttcatgggcagcaacaattggtacctttttttaaggtta
catcatattttatgtgaaagattaacaaaaatgtacgatcgggcggtagcccttgccgaa
gaagaatcacggtacaaacaacagcgtaaggagagtacagctgttgcgttacgattaaag
cccaaaaatgaaattgaaattgaagattactatccagcatttttggatatggttaagaat
gtcctagacggtaatatggaaagtaccgcgtacgaggataccttaagagaaatgtttggt
attcatgcatatattgcttttacgttagataaggttgtaacatacgctgtaagacaatta
cagcatttagtctcagatcctatatgccagcagtgtatggagttattccaacgagagcaa
cgacaaccaaaagaaactagtggtgcaggtggtttatgtgctacggcgtatatgagactt
ggtgcagaaatgtcgtatcaacgtaaagctgagaaagctatggcggatgaaaattgtttt
aaagtatacatttataagaaagactgtaaaatgacaatggaattgttggatacggaaggt
gatgaggcgatggacaacagttgtagggaaagagaaagggaaggagttacggtatctgaa
aaatggtctacatatgttgagaggttttctgctccagctggtcagactagcccgaaagac
acccctaccttaacagacaatgagccaacaaccaatcatcctgtgagtaacgaccaggca
gcaaggggggggaggggcagaaagcgcaagaacactgacattagcaagaagatggaagga
aatggttggagttctttaggcagaatcttggcaggacgtaagcctgtatttctttaccgt
aatgttagacagtggaggaaaagagctgcaagaataatgtcagcatctatggctaatacc
aatcatccggagaaagctgcagagtcaacagacaaagaaaaatcgttagactctgtggat
gcacttctaaaacggcctcctggtttaagattagcagatactggagatacatctgacatt
atcaattctgatgaaacgcaatgcagatttaatcctaatagttaccaaatgctctatatt
gctagtaaggaagcattcctgtataaacaacattctatcagccgtgccagagagtgtcat
ccaaacgtgacaaaacacttgaattcgaagttccatcaatggctagcagcttgggcatcc
aaaaatgtcgcggacgttcaacaccgattatgccaggattggttgatgggacgttatgaa
aacttaattcctcataagacacgagttattacggataatgatcaaacgagatcgccttac
cgacaatacaatcgttatcgagtcgaacgcttgcaatccgatcttctaacagaaccatgt
gtataa
DBGET
integrated database retrieval system
