Frieseomelitta varia: 122532385
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Entry
122532385 CDS
T09482
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fvi03009
]
122532385
Ribosome biogenesis [BR:
fvi03009
]
Eukaryotic type
90S particles
Other 90S particles
122532385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
OB_RRP5_4th
TPR_19
Spt6_S1
HAT_Syf1_M
ARM_TT21
TPR_15
Phage-scaffold
TPR_6
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
122532385
NCBI-ProteinID:
XP_043517064
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MTLANFPRGGEKVQKKRSSNLLFSKHEKIGKRKHEKRRTKEQDEKKTNFVPNTAERLSYA
MISEGLVVLGCIFEVTEYDLLISLPGGLIGRAQITDISERYTNLLQNLIKSEDSQTSEIK
SLPELYSCGDYVICYIKTIQPQEKFQIGISLEPKLINQNLNIVHLDNSSKIVCTINSIED
HGYIADTGLANVRAFIPTKESDNKKCLFPGKQLLCYVKNVETNENLSTITLTPNQKLVNA
VHEIEIRSLDSLIPGTRYNLSIKKVLSNGLCVSLGENNIGFINQLYLDKPLFKYSDNLKI
TGTLLYILPTVKFAYFSSTIDKFRENIKPGDVIEESTALFREFGGIVLQLTKSGTRGFVS
LKRTNIEYDKIIEKFAPGTIHKCRVLSYSWLDGIYICTMQHSLLGQKYFSLSDFKPGDVV
NVKIINIDKGTGFVSVQVGKFNGQITSEHISDEGLSALKKLKINKEVEARVLSVNTGRKR
VYFTLKKSLITSNLPILANIQDAKVGSKHHGTIIQIHKHGVLVKFFGDVKGLIPHTNLDT
ETSDVNWNYSIGQTILIKIHAVDKNLGKITLSVADKDVKIENISFDIGEEVEGTIIESSS
HGVYLRISKNNEQRVTTGFLPAGHMSPCRETAILLASKCIPGDTLSALVFTTMPSLILTR
TFLPQERYRNFEKLKVGDCIPCSIKDIEPDGVRVILPITGCTSFGYISYSNISNFNLLHV
NQILFAKIVSINKKEQQLGLTVSLKKIYDGLSSLKSRMVTSVDTLTLYFNKLLELSGNPY
YENRPITSVKLGQRVTGKIETITAAGLVIRLQDNLVGIVSKDHYSENKKVGDKISGTIIW
KNYLHELVELTTLPSIMHKINGKQNKQIHFPDGKSLRGRILLVTNWFVLILLYGIGKGIL
AAMPVRRHINDMQPDLTPYVVHSKIKCYVILNSNESDFMPICMVKSAFEKKYCIQEKSAD
NNNLKRKKYNEANMIPSKKIKTXLNVMTMIXQNKNIILVXYSLFLKSWNYPNMYMXKNHG
ESSYVDIITXKNKDLVQNVYXFQKYLERSKTKRKSIKENRRSDINDISIENEKPSLSECG
FFWDNNCDSALKNKESSSSSEDEVEEKPKPKRKKLSAVERREQERQKEREIRQREEALAS
NQLPNSVDQFDRLVLASPDSSIVWLQYMAYHLQSTEIEKARAVAKRATKTINFREENERL
NVWNAWLNLESKFGTPESLNDVFQEAIRTNDSLKIHTHMLTVHLEAGRQMELEKIINTII
RKFKQISEVWVNCGEALLKMGLKDKSRHIMQRGLQSLPASEHVNLIAKFAIMENKLGDKE
RSQTLFEQILSSYPKRVDIWSCYVDSLIKSDNIDIARKVLERAVVQTLPPRKMKTLFKKY
INFEERHGTEEDVTRVQQMAVEYVEKQCNKDV
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgacactagcaaattttccaagaggcggggaaaaagttcagaaaaagagatcatcaaat
ttgctatttagcaaacatgaaaaaattggtaaaaggaaacatgagaaacgaaggacaaag
gagcaagatgaaaagaaaacaaattttgtacctaatactgcagaacgattatcatatgca
atgatatctgagggattagtggtattaggatgcatttttgaagtaacagagtacgatttg
ctgatatctttgccaggtggattaatagggcgtgcacaaattacagacattagtgaacgt
tacacaaatttgttgcaaaatttgatcaagtcagaggattctcagacaagtgaaattaaa
tcccttccagagttatatagttgtggggattatgttatatgttatataaaaactatacaa
ccacaagagaaatttcaaattggaatatctcttgaacctaaattaataaatcaaaattta
aatattgtacatctagataatagttcaaaaatagtgtgcaccattaatagcatagaagat
catggttatatagcagatactggattagcaaatgtaagagcgtttattcctactaaagaa
agtgacaataaaaaatgtttgtttccaggtaaacaacttctatgttatgttaaaaatgtt
gaaactaatgaaaatttatcaacaattacattaactccaaaccagaagcttgttaacgct
gttcatgaaatcgaaattagatcattggacagcttgataccaggcacaagatataatctt
tccataaagaaagttttgtccaatggtttatgtgtctcattaggtgaaaacaatatagga
ttcataaatcagctgtatttagataaacctttattcaaatattcagacaatttgaaaatt
actggtacattattgtatattttaccaaccgtcaaatttgcatacttcagttcgacgata
gataaatttagggagaatattaagcctggtgatgttatagaagaaagtactgctttattt
agagaatttggtggaatagtgttacaattaactaaaagtggaacacggggatttgtttcc
ttgaagaggacaaacatcgagtatgataaaatcattgaaaaattcgcacctggtaccata
cacaaatgcagagtattatcatacagttggctagatggaatttatatttgtacaatgcag
cattcgctgttggggcaaaagtatttttcactgtctgatttcaaaccaggtgacgtggtg
aatgtaaaaattataaacattgataaaggcaccggtttcgttagtgtacaagttggtaaa
tttaatggacaaataacatcagagcacatatctgatgaaggtttaagcgccttaaaaaag
ttgaaaatcaacaaagaagtagaagcaagagtcttgtctgttaatactggtcggaaacgg
gtgtattttactttaaaaaagtctttgataacaagtaatttgcctattttggcaaatata
caagacgcgaaagttggatcaaaacatcatgggactatcattcaaatacataagcatggt
gtactggtaaaattttttggagatgtcaaaggtttgattccacacactaatctcgatact
gaaacatctgacgtgaattggaactattcaattggacaaaccattttgataaaaattcac
gcggtggacaaaaatttgggaaagataactttgagtgtggctgataaagacgtaaaaatt
gaaaatatatcatttgatattggcgaagaagtagaaggaacaataatagaatcatcttct
cacggagtatatttaagaatcagtaaaaataatgaacagagagttactacgggcttttta
ccggctggtcatatgtcaccttgtagggaaactgctattcttttagcatcaaaatgtatt
cctggtgatacgctctcagctctggtatttactacaatgcctagtttaattctaactagg
acatttctaccacaagaaagatatagaaattttgaaaaactaaaagtaggagattgtata
ccttgttcaatcaaagatatagaaccggatggcgtaagagtaattttaccaattacagga
tgtacatcgtttggatatatatcttatagcaacattagtaattttaatctgctgcacgta
aatcaaattttatttgcaaagatagtttctattaataagaaagagcagcaattagggtta
acagtatcattgaagaaaatatatgacggtttatccagccttaaaagcaggatggtgaca
tcagtagatacactgactttatattttaataaattactagaactttcaggaaatccatat
tacgaaaatagaccaattacatctgtaaaattgggacagagagttacagggaagattgaa
actatcactgctgctggtttggttatacgattgcaggataacttagtgggcatagtatct
aaggatcattactctgaaaataaaaaagtaggagacaaaatttctggaacgattatatgg
aaaaattacttgcacgaacttgtcgaattgactacattaccgtcaataatgcacaaaata
aatggaaaacaaaacaagcaaatacactttcccgatggcaaatcgttacgcggtagaatc
ttgttggtgacaaattggtttgttttaatattgttgtatggcattggtaaagggattttg
gctgcaatgccagtacgtcgtcatataaatgatatgcagccagatttaacaccttatgtt
gttcattctaaaatcaaatgttacgtcatattaaattccaacgaatctgattttatgcct
atttgcatggtaaaatctgcgttcgaaaagaaatactgcatacaagaaaaatcagctgat
aataacaacttgaaacgaaagaaatacaatgaagcaaacatgataccctcaaaaaaaata
aaaacttagttaaatgtaatgacaatgatatgacaaaataaaaatattattttagtttaa
tacagtttatttctcaaatcatggaattatcctaacatgtatatgtagaaaaatcatgga
gagagcagttatgtagatattatcacctagaaaaataaagatcttgttcaaaatgtttat
taatttcaaaaatacttggaaagatcaaagacgaaaagaaaatctatcaaagaaaatcgg
agaagtgacattaatgatattagcattgagaatgaaaagccaagtttatctgaatgtgga
tttttctgggataacaactgcgattcagctcttaagaacaaagaatcatctagcagtagc
gaagatgaagtggaagaaaaaccaaagccaaagaggaagaaattgagtgctgttgaacgt
cgagaacaagagagacaaaaagaacgtgaaattcggcaacgagaggaagcattagccagt
aatcaactaccaaattctgtggatcagtttgatagattagttctggccagtccagacagt
tcaatagtatggttacagtatatggcatatcatttgcagtcaactgaaattgagaaggcg
agagcagttgcgaaaagggcgacgaaaacgattaatttcagagaggagaatgaaagatta
aacgtttggaatgcgtggttgaatttagagtctaagtttggaacgccagaatcattaaat
gatgtttttcaagaggcaataaggacgaatgattcattgaagatacacactcatatgttg
actgttcatctcgaagctggtagacagatggaattagagaaaattattaatactatcatt
agaaagtttaagcaaatctctgaggtatgggttaattgcggagaagcattattaaagatg
ggtttgaaagataaatcgaggcacattatgcagagaggattacaatctttgccagcatca
gaacatgtgaatctaatagcaaagtttgcgatcatggaaaacaaacttggggataaagag
agatcgcaaactttgttcgaacaaattttaagctcgtatcccaagcgagtggatatatgg
tcttgttatgttgattccttaattaaatctgataacattgatatagcaaggaaagtctta
gagagagctgtggttcagacattaccgcctagaaaaatgaaaactctattcaaaaaatac
attaatttcgaagaacggcatggtactgaggaagatgtcactcgtgttcagcaaatggcc
gtagaatatgttgagaagcaatgtaacaaagatgtttga
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integrated database retrieval system
