Frieseomelitta varia: 122532655
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Entry
122532655 CDS
T09482
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
fvi
Frieseomelitta varia
Pathway
fvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122532655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122532655
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122532655
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
122532655
NCBI-ProteinID:
XP_043517568
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MTDDKTEFDWGNEKLQRAQKTVDESPYDLEAWSILIREAQNRPITEVRPVFEKLVTVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLATYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVINPMINM
EQLWKDYMAFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHP
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATSTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRCKHHVYVAAALMEYYCT
KDKNIAFRIFELGLKKFGDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLDLYPCTPMEL
RSIGYMEVSSVGRSTAGALPRIPDPEEAIASLPRPDISQMIPYKPKVNPLPGEHPVSGGS
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLMDVFNRIQLPDHAPLPVADNGCDTKLFDLA
KSVHWIVDESNDGVSIGSKRRRSRLGNDDSEEEDLPPPPANDIYRQRQQKRVK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgataaaacagaatttgattggggaaacgagaaactacaacgtgcccagaaa
acagtggatgaatctccttacgatttggaagcatggagcatccttatcagagaagcacaa
aacagacctattacagaagtaaggccagtctttgaaaaacttgtaactgtgtttccttct
gcgggtcgatattggaaaatttatatagaacaagagatgaaaatgcgcaactttgaaaag
gtggaaaagctcttccaaaggtgccttatgaaaatcttaaatattgaattgtggaagctc
tacctttcatatgtgaaagaaacaaaagccagtcttgcaacatacaaggaaaaaatggca
caagcctacgattttgcactagataaaattggcatggatatacattcctacagtatatgg
aatgactatgttacatttctcaaaagcgttgaagctgttggttcatatgctgagaatcag
aaaatcagtgcagtaagaaaggtatatcaacggggtgttattaatcctatgataaatatg
gaacaattatggaaagattatatggcatttgagcaaaatattaatccaataattgcagaa
aaaatggctattgaacgttccagagattacatgaacgcaagaagagttgctaaagaatta
gaagctgtaacaagaggattgaatcgaagtgctcctagtgtaccaccaacaggtcatcca
gaagaagttaaacaggttgaattgtggaagaagtatattgcatgggaacgcagtaatccg
ttaagaacggaagatacttctctagttgcccgccgagtaatgtttgctatagaacaatgt
ttattatgtttgggccatcatcctgcagtgtggcatcaagctgcacattttttagaactt
agttcaaaaatattaacagagaaaggtgatgtaaatgctgcgaaaaatttaagtgatgaa
gctgcaacaatgtttgaaagagcaacaagtacattgttatccaagaatatgttattgtat
tttgcacatgcagattttgaagaaggacgagtaaaatatgaaaaagttcatcaaatatat
caaaagttccttgacatacctgatattgatcctacattagcatatgtacaatacatgaaa
ttcgcgagacgtgctgaaggtataaaatcggctagaacggtgttcaaaagagctcgtgaa
gaccctagatgtaaacatcatgtatacgttgctgctgctttaatggaatattactgtacc
aaggataaaaatattgcttttcggatattcgaactaggtttaaagaaatttggggataat
cctgattatatactttgttatattgactatctatcgcatttgaacgaggacaataataca
agagttttatttgagagagttttatcatctggtagtttagaacctgaaaaatcagtcgac
atatggaaccgatttttagaatttgaatctaatattggagatctagctagcattgttaaa
gttgagaaacgacgtagcgccgtgttagaaaagatcaaagaatttgagggcaaagaaacg
gcacaattagtagatagatataaattcttggatctgtatccatgtactccaatggaatta
cgatctatcggatatatggaagtgtcgagtgttggaagaagtacagctggtgcattaccg
cgaataccagatccagaagaagctatagcatcattgccaagacccgacatatcacaaatg
ataccttataaaccaaaagtaaatccattacctggagagcacccagtttcaggtggttcc
tttccgttaccgccggctgcagcacaactttgtacgatgctaccaccacctggatgtttc
agaggaccatttgtggctgttgatttgcttatggatgttttcaaccgaatacagttacca
gatcatgctccattaccagtagcggataatggatgcgatacaaaattgttcgatctagca
aaatctgtacattggatcgttgatgaaagtaacgatggagttagtattggatctaaacgt
agaagatcgcgcctgggaaatgatgatagcgaagaagaagatttaccaccaccaccggca
aatgacatatatcgccaaagacaacaaaaacgagtcaagtga
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