Frieseomelitta varia: 122533093
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Entry
122533093 CDS
T09482
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122533093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvi03041
]
122533093
03009 Ribosome biogenesis [BR:
fvi03009
]
122533093
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122533093
Spliceosome [BR:
fvi03041
]
Complex A
U2 snRNP components
U2 related factors
122533093
Complex B
122533093
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122533093
Ribosome biogenesis [BR:
fvi03009
]
Eukaryotic type
90S particles
Helicases
122533093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
SRP54
nSTAND3
ResIII
Flavi_DEAD
T2SSE
Lantibiotic_a
AAA_7
ABC_tran
ATPase
AAA_25
AAA_16
AAA_30
Motif
Other DBs
NCBI-GeneID:
122533093
NCBI-ProteinID:
XP_043518407
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSKRRIEVVDPYVKRKADGSATSNSTTTPSAAPKNQVQLNPYTSLPYTPRYHEFYKKRIT
LPVFEYRTDFMRLLAQHQCIVLVGETGSGKTTQIPQWCVEYSRRIGNKGVACTQPRRVAA
MSVAQRVSEEMDVALGQEVGYSIRFEDCSSPKTILKYMTDGMLLREGMSDPMLDAYQVIL
LDEAHERTLATDLLMGVLKEVIKQRPDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP
VEIFYTPEPERDYLEAAIRTVIQIHMCEEVAGDLLLFLTGQEEIEEACKRIKREMDNLGP
EVGELKCIPLYSTLPPNLQQRIFEPAPPTKPNGAIGRKVVVSTNIAETSLTIDGVVFVID
PGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQDNT
YPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDL
GAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMRFA
HIDGDHLTLLNVYHAFKQNFEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDRFCLKRTST
DFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSSCLDHKPEWVIYNE
FVLTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEVIQAKLDSKQYQEGF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggagaatcgaggttgtggatccgtatgttaaacggaaggcagatggctca
gctacatctaatagcacaactacaccttcggcagcaccaaaaaatcaagttcagctgaat
ccttacactagcctaccttatactccaagatatcatgaattttataaaaaaagaatcaca
ttacctgtatttgagtaccgtactgattttatgaggttattagcacaacatcagtgtatt
gtacttgttggagaaacaggttctggtaaaacaacacaaataccacaatggtgtgtagaa
tattcaaggcgtattggcaacaaaggtgttgcttgtactcaaccaagaagagtagctgct
atgtccgttgcacaaagagtctcagaagaaatggatgtggcattaggtcaagaagtggga
tatagtattcgttttgaagattgtagttctccaaaaactatattaaagtacatgactgat
ggtatgctgttacgtgaaggcatgtcagatcccatgcttgatgcctatcaagtgatatta
ttagatgaagctcatgaaagaactttagccacagacttgcttatgggtgtgttaaaggaa
gtgattaaacagagaccagatttgaaacttgtgattatgagtgcaactttagatgctgga
aaatttcaacagtattttgataatgcacccttaatgaatgtacctggcagaactcatcct
gttgaaattttttatacacctgaacctgaaagggattacttagaggctgctatcaggaca
gttattcaaattcatatgtgtgaagaagtagcaggagatttacttctctttttgacgggt
caagaggaaattgaggaagcttgtaaaagaatcaaaagagaaatggataatttaggtcca
gaagtaggtgaacttaagtgtataccactctattccacactgcccccaaatcttcagcaa
agaatctttgagccagcaccacctacaaaacctaatggtgctattggtagaaaagttgta
gtttcaacaaatattgcagaaacatcgttaactatcgacggtgttgtctttgtgatagac
ccaggatttgcgaagcaaaaggtatataaccctagaattcgtgtagaatctcttcttgta
tcacctataagtaaagcttctgctcagcaaagagctggtagagctggtcgtacaagaccc
ggaaaatgttttagattgtacacagaaaaggcatataaaaatgagatgcaagataatacg
tatcctgaaatcttaagatctaatcttggtagtgttgtattgcagttgaaaaaacttggc
attgatgatttggtgcatttcgattttatggatccacctgcaccagaaacccttatgagg
gctttagaacttcttaattatttggctgctttagacgatgatggaaatctcacagatttg
ggtgctgtgatggcagaatttccattagatcctcagttagcaaaaatgcttattgcatcc
tgcaatcataattgcagtaatgaaatattgagcattactgctatgttgtcagtcccacag
tgttttgtgaggccaaatgaatcaaaaaaagctgcggatgatgctaaaatgcgatttgca
catatcgacggagatcatctaacgttattgaacgtgtatcatgcttttaaacaaaatttt
gaagacccacaatggtgttacgataactttgtcaattaccgatctttaaaaagtggagat
aatgttaggcaacaactaagtagaataatggatagattttgtttgaaacgtacttccaca
gacttcacatcaaaagattattatatcaatattagaaaagctcttgtgaatggtttcttt
atgcaggttgctcatttagaaaggactggtcattatttgactattaaagataatcaaatt
gtacaacttcatccaagcagttgtttggatcataaacccgaatgggtaatttataacgag
ttcgtgcttacgaccaaaaattatatcagaacagttacagatattaaacctgattggttg
cttaaaatcgcaccacaatattacgatttacaaaactttccacaatgtgaagcaaaaaga
caattggaagtaattcaagcgaaattagattcaaaacaatatcaggaaggattctaa
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