Frieseomelitta varia: 122533778
Help
Entry
122533778 CDS
T09482
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
fvi
Frieseomelitta varia
Pathway
fvi03030
DNA replication
fvi03410
Base excision repair
fvi03420
Nucleotide excision repair
fvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122533778
03410 Base excision repair
122533778
03420 Nucleotide excision repair
122533778
03430 Mismatch repair
122533778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fvi03032
]
122533778
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122533778
DNA replication proteins [BR:
fvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122533778
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122533778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
Rad17
BRCT_2
AAA_14
RuvB_N
RNA_helicase
AAA_30
NTPase_1
AAA_33
AAA_19
AAA_16
PTCB-BRCT
AAA_assoc_2
AAA_5
RCF1-5-like_lid
AAA_18
AAA_7
Motif
Other DBs
NCBI-GeneID:
122533778
NCBI-ProteinID:
XP_043519755
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MSKDIRSYFQPVKTSSNVAPTKPTKRRIISSDEDEDEKPQSPLKRSKKTKTSEKEIINSD
SDKNIKVLSPSDMFGKTPVSRQEAPKISKQKKKSVKAAGISKSLQKKEAKGHNDDDFEAT
LCQLDTSDIEQKYLSETKVDEDSQLSESSVENKGKSPVKNEENEKKKTFNRSNQQKDNKR
HELKNKKHSSSSSNEDIEHKNSKRNSKSRQKSKTSTISKMQVEHKETKKTSPKKIDTSDI
YEEKIEKRKQHVAMYQQYLQRGGARNPGSKEIPVGAENCLVGLSFVITGVLDSLEREEAE
ELIKKYGGRILHQISKKTDYVIVGDQAGPTKLSKANSLNIKKISEDDLLELIRTRPAGQS
DNAKQSPVKSKQRSKKRSIESDESSPSKKIKITSNEETKKTTKICSPRKKEHSNKEIEDS
LKVSPQIQELDDKDTKVKPLIEKQHNEHKESVVQNKIEINDIKDIKIQTDTSQDVNGNIP
VQALVEKYRPKTMKQVLGQQGDKSNAKKIYSWLANWHKNQSGQVKHIRPSPWAKDDNGAF
FKAVLLSGPPGIGKTTTVQVVCNELGFDLIEFNASDTRSKKLLKEEVSELLSNTTLKNYF
QDVKNKPSLKHVLLMDEVDGMAGNEDRGGLQELINLIKSTDIPIVCICNDRNNPKMRTLA
NYTFDLRFPKPRLEQIRAAMKSICFKENITISNEDLDRLIESTNQDIRQVINHLALFVGQ
TGSQKKNEKKHINKDLKLGPWDVVKKVFSVEEHKHMNINDKSDLFFHDYNIAPLFVQENY
LLVIPQAPKNKLLERIAESAESLALGDIVEKSIRSNNAWSLLPVQACYSSVIPGTVMSGH
IGSQISFPAWLGRNSKAGKFNRLMQEITLHARLATSASKEAINLDYIKSLRDTIIRPLVI
DGIENVNAAIDVMNNYHLLREDLDSLVEISLWPGDRDPFQVIDSKVKAAFTRAYNKNSVA
VPYIVSDTSKKKAVSSVQEDFLVEEEEEMDSDHNDDNVDTDKMIKAKKATSKNIESKGKN
TNKTEEKGKKDNNKPSKRGKGRGKAK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagatatacgatcctattttcaacctgttaaaacgagttccaatgtcgctccg
acgaaacctaccaaaagacggattatttcgtctgatgaagatgaagacgagaaacctcag
tctccgcttaagcggtccaagaaaacaaagacatcggagaaggagataattaattctgat
tccgacaaaaacattaaagttctttctccttctgatatgtttggtaaaacaccagtaagc
aggcaagaagcacctaaaatatctaaacaaaagaagaaatctgtaaaagcagctgggata
tctaaatcgttacaaaagaaggaggctaaaggtcataatgatgatgattttgaagctact
ttatgccagttagatacatctgatattgaacagaaatatttaagtgagactaaagttgat
gaagattctcaattatctgagagcagtgttgaaaataaaggaaagtcacctgttaaaaat
gaagaaaatgaaaagaaaaaaacatttaatagatcaaatcaacaaaaagataataagaga
catgaattaaagaataaaaaacattctagtagtagttcaaatgaagatattgaacataag
aattccaaacgcaatagtaaatctagacagaaatctaaaacttctactatttctaagatg
caagttgaacataaagaaacaaagaaaacttctcccaaaaagatagacacttctgatata
tatgaagaaaaaattgaaaaaaggaaacaacatgttgcgatgtatcagcaatatcttcaa
agaggtggagccagaaatccaggttcaaaagaaatccctgttggcgctgaaaattgtctg
gtaggattgagttttgtaataactggtgttttggattctttagaaagagaggaagctgaa
gaacttattaaaaaatatggcggacgaattttacatcaaatttcaaaaaagactgactat
gttatagtaggtgatcaagctggtcctacaaaattgtcgaaagctaatagcttaaacata
aaaaaaatatcagaagatgatttattagagctaatacgaacaagacctgctggtcagtct
gataatgcgaagcaatctcctgtaaaatcaaaacagagatcgaagaaaagatcgatagaa
tcagatgaatcatcaccttcaaagaaaataaaaattacatcaaatgaagaaacaaaaaag
acaacaaaaatatgttcaccgcgcaaaaaagaacatagtaataaagaaatcgaagattcc
ttaaaagtatcaccacaaatacaagaacttgatgataaagatacaaaagtaaaacctttg
attgagaagcaacataatgaacataaagaatcggttgtacaaaataaaatagagataaac
gatataaaagatataaaaatacaaacggacacttcacaagatgtaaatggaaacatacca
gtgcaagcattggttgaaaaatataggccaaaaactatgaaacaagtactagggcaacaa
ggagacaaaagtaatgctaaaaaaatatatagttggttagcgaattggcataaaaatcaa
agtggtcaagtgaaacatataagaccgagtccttgggcaaaagatgataatggagctttc
ttcaaagctgttttgttatctggtcctcctggaattgggaagactacaactgtccaagtt
gtttgtaatgagttaggttttgatctcatagaatttaatgcatctgatactagaagtaaa
aagcttttgaaagaagaagtatcagaacttttatctaacactacgttaaaaaattatttt
caagatgttaaaaataaaccatcattgaaacacgtgttattaatggatgaagtggatgga
atggctggtaatgaggatcgtggtggtctacaggaattaattaatttgatcaaatcaact
gatatacctattgtttgcatttgcaatgatcgaaataatcctaaaatgagaacgcttgct
aattatacgtttgatcttcgttttccaaaacctagattggaacagattagggctgcaatg
aaatctatatgttttaaagaaaatattacaatttcaaatgaagatcttgatcgtttaatc
gaatcaactaatcaggatattcgtcaagttattaatcatttggcattatttgttgggcaa
actggttctcaaaagaaaaacgagaagaaacatataaacaaagatttgaaattgggtcct
tgggatgttgtaaaaaaagtattttccgtagaagaacataaacacatgaatataaatgat
aagagtgatttattttttcatgattacaacatagcaccattatttgtgcaagaaaattat
ttactagttataccgcaagctccaaaaaataaattgttagaaaggatagcagaaagtgct
gaaagtttagcactaggagatatagttgaaaaatctataagaagtaataatgcttggtct
cttttaccagtacaagcttgttattcttctgtaattcctggaacagtaatgtctggtcac
atcggtagtcaaattagttttccagcttggcttggacgtaattcaaaagctggtaaattt
aatcgtttaatgcaggaaattactttacatgcacgtttggctactagtgcaagtaaggaa
gctataaatttagattatattaaatctctcagagatactattatcagacctttagtaatt
gatggcattgaaaatgtaaatgcagcaatagatgttatgaacaattatcacttactcagg
gaagatttagattctctggtagaaatttctttgtggcctggtgatcgtgatccatttcaa
gttatagatagcaaggtaaaagctgcttttacaagggcatataataaaaattctgtagct
gtaccatatatagtgagtgatacatcaaagaaaaaagcagtgtcaagtgtacaagaagat
ttcttggtagaagaggaagaagaaatggattctgatcataatgacgataatgttgataca
gataaaatgattaaggcaaagaaagctacaagcaagaatattgaatcaaagggtaaaaat
actaataaaactgaggagaaaggcaaaaaagataataataagcccagtaaacgtggaaaa
ggacgaggaaaagcaaaataa
DBGET
integrated database retrieval system
