Frieseomelitta varia: 122534231
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Entry
122534231 CDS
T09482
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
fvi
Frieseomelitta varia
Pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122534231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvi03041
]
122534231
Spliceosome [BR:
fvi03041
]
Complex B
Other components
Prp19-related factors
122534231
Complex C
122534231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
RRM_YTH1
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_10
RRM_3
zf-CCCH_12
RRM_PARP14_3
zf-CCCH_PARP12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
122534231
NCBI-ProteinID:
XP_043520603
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MATSKTTNMYNRQNWEDAEFPILCQTCLGDNPYIRMTKERYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDSEIGKIDPTSPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYVGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTVSAAEATREILEPVPGLPGALPPPPESMGNNFFNLQTTPGMMPPMMIPPP
PVAPQFMFPPQMATATATPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcaaaaacgacgaatatgtataatagacaaaattgggaagacgctgaattc
ccaatattgtgtcaaacttgtttgggcgataatccttacattcgtatgacaaaagaaaga
tatgggaaagaatgcaaaatatgcatgcgtccgttcacagtattcagatggtgtcctggc
gcgagaatgcgatttaagaagacagaagtgtgtcagacatgcagtcgtttaaaaaatgtt
tgtcaaacatgcttacttgacttggaatatggtttgccgattcaagtacgtgatgcagca
ctgaaaatcaaagatgatttgcccagatctgatgtgaacaaggagtactatgttcaaaat
atagatagtgaaattggaaaaatagatcccacatcgccagcaggtgctgttggtaaatct
gcagctgctagcgatttgttaatgaagctagcaaggactagtccctattacaagagaaac
aggccacacatttgctccttttgggttaaaggagaatgtaaacgaggagaagaatgtcca
tatcgtcatgagaaacccactgatcctgatgatccattagctgatcagaacatcaaagat
cgttactatggtgttaacgatcctgttgctgacaaattaatgcgccgtgcagcagccatg
cctaagttagatccgccagaggataagtccattacgacgctctacgttggtaacctgggt
gacgttttaacagagaagcagttacgcgatcatttctatcaatatggagaaatacgttcc
gtgactatggttcctcgtcaacagtgtgccttcattcagtacacacaaaggagtgctgcc
gaagcagcggcagaaagaacattcaacaaattgatattaggaggacgaagattaacgatt
aaatggggacgttctcagggaagacagacagtatctgcagcagaagcgactagagagatc
ttagaacctgtaccaggtttacctggtgctctaccacctccaccagagagcatgggaaat
aattttttcaacctgcaaaccactcctggcatgatgccaccaatgatgataccacccccg
ccagttgctccccaattcatgtttccacctcaaatggcaactgctacagcaacacctatt
tttccacctggaacaactccaatacactatccaagtcaagatccgtcaagaatgggtgca
tctcaaggcatagggaaaccttggccagaggaataa
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