KEGG   Frieseomelitta varia: 122534281
Entry
122534281         CDS       T09482                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
fvi  Frieseomelitta varia
Pathway
fvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    122534281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fvi03400]
    122534281
DNA repair and recombination proteins [BR:fvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     122534281
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I CMS1 AAA_27 DUF6236
Other DBs
NCBI-GeneID: 122534281
NCBI-ProteinID: XP_043520712
LinkDB
Position
Unknown
AA seq 921 aa
MAVQPNQQFNMDPAGQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGSDALFAAQEVFKT
TSVCKMIGADPYKTEGVILNKNHFESFIRDLLLVKQYRIEVYINQGSAKNQNWVLEYKGS
PGNLTQFEDVLFDNNDVVVSVRVIAVKLGMEGKSRIVGLSCVDTTATSFSVCEFQDNESF
SNLESLVVTLAPKECLLIQGEGSSEFQALKQVMERNNVMVTTRKKSEFSSESVIQDLNTL
IKFKKGQQQNVQSLPEANLSFAMSAISALIKYLDLTSDEGNLNEFTIDQIKESRYLKLDS
AAIKALNIEPRADTSSTLNGNAPTSILGLLDKCRTPQGHRLLAQWVRQPLKDLSLIKERH
DIVEALVNDNELRSNLSEDHLRRIPDLQMLAKKLARKKATLQDLYKIYMCVSCLPALLEQ
FSNVNVIALKTMFSDPLSELIKDMDKFQQMIEQTIDLDSAGKGDFLVRAEFDDELKELKN
IMNEMETKLQSQLAKVANDLSIEAGKSLKLESNQQFGYYFRVTLKEEKVLRNKKQYIILD
SNKSGVRFRSNKLNDLNDNYLSARDKYTIEQKKVVTEIIEIAAGYSGTIKATGNVLASLD
VLTAFASAAISANKPYVRPEMLPSEMGEFNLTQVRHPCLEIQEGVDYIANDISFKRGECH
FCIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQAKISLLDCILARVGADDSQLKGLS
TFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATH
FHEITKLEEEIPAVKNQHVTALVDDDKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEF
AKRKQAELEDYQDSVFEGSDNPQKKKDIIKEAEILIAEFINKCKNLDKSLSDVELEDKIS
IFKTEVLSHENPYIKTLLASP
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggctgttcaaccaaatcaacaatttaatatggatccagcaggtcaacagagctttgtt
agattttttaaaaatctacccgaaaaacttaatactaccatacgatttttcaatagatca
gattattatacactacatggtagtgatgctttatttgctgcacaagaagtttttaaaact
acatcagtctgtaagatgataggagctgatccatataaaactgaaggtgttattcttaat
aaaaatcattttgagtcttttatacgggatttattgttggtaaagcaataccgaatagaa
gtatatattaatcaaggctcagcaaaaaaccaaaattgggtattagagtataaaggttct
cctggtaatttaacacaatttgaagatgtgttgtttgataataatgatgttgttgttagt
gtacgtgtcatagctgtaaaattaggaatggaggggaaatctagaattgttggtttaagc
tgtgtagataccacagcaacttcgttttctgtttgtgaatttcaagataatgaatcattt
tccaatttagaatcattggttgttactcttgctcctaaagaatgtttattaattcaaggt
gaaggcagttctgaatttcaagcccttaaacaagtcatggaacgaaataatgtaatggtc
actacaagaaaaaaaagtgaattctctagtgaatcagttatacaagatttaaacacttta
ataaaattcaagaaaggtcaacagcaaaatgtacagtctttacctgaagccaatttaagt
tttgctatgtcagctatttccgcacttattaaatatttagatttaacatcagatgaagga
aacttaaatgaatttactatagatcaaataaaggagtcacgttacttaaaactagattca
gctgctataaaagcactcaatattgaaccgcgtgccgatacttcttctactttaaatgga
aatgcacctacaagtattttgggtcttttggataaatgcaggactccacaaggtcataga
cttcttgcacaatgggttagacaacctttgaaagacctatctcttataaaagaaagacat
gatattgttgaagcattggtaaatgacaacgaattacgatctaatcttagcgaagatcat
ttaagacgtataccggatttacaaatgcttgcaaaaaaattggccagaaaaaaagcaact
ttacaagacctctataagatttacatgtgtgtatcatgtttgcctgcacttttagaacag
ttttctaatgtcaatgtaatagctttaaaaacgatgttcagtgatcctttgagcgaactt
attaaagacatggacaaatttcaacaaatgatcgaacaaacaattgatttagattccgcc
gggaaaggagatttcttagtacgagccgaatttgacgatgaattaaaagaattaaagaat
attatgaatgaaatggagacaaaattacaatcccaattggctaaagttgccaatgatctt
tcaattgaggctggaaaatcattaaaactagaatcgaatcaacagtttggatattatttc
cgtgtaacattgaaggaagaaaaagtgcttagaaataaaaaacagtatattattttggat
tccaataaaagtggtgtacgtttccgaagcaataaattaaatgatttaaatgataattac
cttagtgccagagataagtatacaattgaacagaagaaggttgttacagagataattgaa
attgcagctggttacagtggtacaataaaagctactggcaatgtattagcatctcttgat
gtcctgactgcctttgcttctgctgctataagtgctaataaaccgtatgttcgtcctgaa
atgctgcctagcgaaatgggtgaatttaatcttacccaagttcgacacccatgtttggaa
attcaagaaggagtggattatatagctaatgatattagttttaaaagaggtgaatgtcat
ttttgcatcataactggtccaaacatgggaggtaaaagtacctatataaggtctgccggt
gttagtgccttaatggcacatattggaagctttgttccttgtgatcaagcaaaaatatca
ctattggattgtatattagcccgtgtaggagctgatgattctcaattgaaaggtctttct
acatttatgatggaaatgatagaaactgctgctatattaaagacagcaacatgtaattct
ctcgtgttaattgacgaattaggcagaggaacttctacttatgaaggttgcggtatagca
tggtcaatcgccgaatatttagcaaaagaaatcaaatgttattgcctttttgcaacacat
tttcacgaaataactaaattagaagaagagatacctgctgttaaaaatcaacatgttaca
gcccttgtagacgatgacaaattaactttgttatacaaagtgaagccaggtatatgtgat
caaagttttggcatacatgttgctaaaatggctaatttcccacaagatgttatagagttc
gctaagcgtaaacaagcagagcttgaagattaccaagattcagtttttgaaggttctgat
aatccgcaaaagaagaaagatattataaaggaagccgaaattcttattgcagaatttatt
aacaaatgcaagaatttagataaatcattatctgacgtggaactggaagataaaatttca
atatttaaaactgaagttctatctcatgaaaatccctacatcaaaacacttttagcatct
ccttaa

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