Frieseomelitta varia: 122534281
Help
Entry
122534281 CDS
T09482
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
fvi
Frieseomelitta varia
Pathway
fvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122534281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122534281
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122534281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
CMS1
AAA_27
DUF6236
Motif
Other DBs
NCBI-GeneID:
122534281
NCBI-ProteinID:
XP_043520712
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MAVQPNQQFNMDPAGQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGSDALFAAQEVFKT
TSVCKMIGADPYKTEGVILNKNHFESFIRDLLLVKQYRIEVYINQGSAKNQNWVLEYKGS
PGNLTQFEDVLFDNNDVVVSVRVIAVKLGMEGKSRIVGLSCVDTTATSFSVCEFQDNESF
SNLESLVVTLAPKECLLIQGEGSSEFQALKQVMERNNVMVTTRKKSEFSSESVIQDLNTL
IKFKKGQQQNVQSLPEANLSFAMSAISALIKYLDLTSDEGNLNEFTIDQIKESRYLKLDS
AAIKALNIEPRADTSSTLNGNAPTSILGLLDKCRTPQGHRLLAQWVRQPLKDLSLIKERH
DIVEALVNDNELRSNLSEDHLRRIPDLQMLAKKLARKKATLQDLYKIYMCVSCLPALLEQ
FSNVNVIALKTMFSDPLSELIKDMDKFQQMIEQTIDLDSAGKGDFLVRAEFDDELKELKN
IMNEMETKLQSQLAKVANDLSIEAGKSLKLESNQQFGYYFRVTLKEEKVLRNKKQYIILD
SNKSGVRFRSNKLNDLNDNYLSARDKYTIEQKKVVTEIIEIAAGYSGTIKATGNVLASLD
VLTAFASAAISANKPYVRPEMLPSEMGEFNLTQVRHPCLEIQEGVDYIANDISFKRGECH
FCIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQAKISLLDCILARVGADDSQLKGLS
TFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATH
FHEITKLEEEIPAVKNQHVTALVDDDKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEF
AKRKQAELEDYQDSVFEGSDNPQKKKDIIKEAEILIAEFINKCKNLDKSLSDVELEDKIS
IFKTEVLSHENPYIKTLLASP
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcaaccaaatcaacaatttaatatggatccagcaggtcaacagagctttgtt
agattttttaaaaatctacccgaaaaacttaatactaccatacgatttttcaatagatca
gattattatacactacatggtagtgatgctttatttgctgcacaagaagtttttaaaact
acatcagtctgtaagatgataggagctgatccatataaaactgaaggtgttattcttaat
aaaaatcattttgagtcttttatacgggatttattgttggtaaagcaataccgaatagaa
gtatatattaatcaaggctcagcaaaaaaccaaaattgggtattagagtataaaggttct
cctggtaatttaacacaatttgaagatgtgttgtttgataataatgatgttgttgttagt
gtacgtgtcatagctgtaaaattaggaatggaggggaaatctagaattgttggtttaagc
tgtgtagataccacagcaacttcgttttctgtttgtgaatttcaagataatgaatcattt
tccaatttagaatcattggttgttactcttgctcctaaagaatgtttattaattcaaggt
gaaggcagttctgaatttcaagcccttaaacaagtcatggaacgaaataatgtaatggtc
actacaagaaaaaaaagtgaattctctagtgaatcagttatacaagatttaaacacttta
ataaaattcaagaaaggtcaacagcaaaatgtacagtctttacctgaagccaatttaagt
tttgctatgtcagctatttccgcacttattaaatatttagatttaacatcagatgaagga
aacttaaatgaatttactatagatcaaataaaggagtcacgttacttaaaactagattca
gctgctataaaagcactcaatattgaaccgcgtgccgatacttcttctactttaaatgga
aatgcacctacaagtattttgggtcttttggataaatgcaggactccacaaggtcataga
cttcttgcacaatgggttagacaacctttgaaagacctatctcttataaaagaaagacat
gatattgttgaagcattggtaaatgacaacgaattacgatctaatcttagcgaagatcat
ttaagacgtataccggatttacaaatgcttgcaaaaaaattggccagaaaaaaagcaact
ttacaagacctctataagatttacatgtgtgtatcatgtttgcctgcacttttagaacag
ttttctaatgtcaatgtaatagctttaaaaacgatgttcagtgatcctttgagcgaactt
attaaagacatggacaaatttcaacaaatgatcgaacaaacaattgatttagattccgcc
gggaaaggagatttcttagtacgagccgaatttgacgatgaattaaaagaattaaagaat
attatgaatgaaatggagacaaaattacaatcccaattggctaaagttgccaatgatctt
tcaattgaggctggaaaatcattaaaactagaatcgaatcaacagtttggatattatttc
cgtgtaacattgaaggaagaaaaagtgcttagaaataaaaaacagtatattattttggat
tccaataaaagtggtgtacgtttccgaagcaataaattaaatgatttaaatgataattac
cttagtgccagagataagtatacaattgaacagaagaaggttgttacagagataattgaa
attgcagctggttacagtggtacaataaaagctactggcaatgtattagcatctcttgat
gtcctgactgcctttgcttctgctgctataagtgctaataaaccgtatgttcgtcctgaa
atgctgcctagcgaaatgggtgaatttaatcttacccaagttcgacacccatgtttggaa
attcaagaaggagtggattatatagctaatgatattagttttaaaagaggtgaatgtcat
ttttgcatcataactggtccaaacatgggaggtaaaagtacctatataaggtctgccggt
gttagtgccttaatggcacatattggaagctttgttccttgtgatcaagcaaaaatatca
ctattggattgtatattagcccgtgtaggagctgatgattctcaattgaaaggtctttct
acatttatgatggaaatgatagaaactgctgctatattaaagacagcaacatgtaattct
ctcgtgttaattgacgaattaggcagaggaacttctacttatgaaggttgcggtatagca
tggtcaatcgccgaatatttagcaaaagaaatcaaatgttattgcctttttgcaacacat
tttcacgaaataactaaattagaagaagagatacctgctgttaaaaatcaacatgttaca
gcccttgtagacgatgacaaattaactttgttatacaaagtgaagccaggtatatgtgat
caaagttttggcatacatgttgctaaaatggctaatttcccacaagatgttatagagttc
gctaagcgtaaacaagcagagcttgaagattaccaagattcagtttttgaaggttctgat
aatccgcaaaagaagaaagatattataaaggaagccgaaattcttattgcagaatttatt
aacaaatgcaagaatttagataaatcattatctgacgtggaactggaagataaaatttca
atatttaaaactgaagttctatctcatgaaaatccctacatcaaaacacttttagcatct
ccttaa
DBGET
integrated database retrieval system