Frieseomelitta varia: 122534508
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Entry
122534508 CDS
T09482
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122534508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvi03041
]
122534508
03009 Ribosome biogenesis [BR:
fvi03009
]
122534508
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122534508
Spliceosome [BR:
fvi03041
]
Complex A
U1 snRNP components
U1 related factors
122534508
Complex B
122534508
Ribosome biogenesis [BR:
fvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
122534508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
P22_portal
DUF6505
Motif
Other DBs
NCBI-GeneID:
122534508
NCBI-ProteinID:
XP_043521138
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MYNNTYSNHTSYRPRGSRNCSSRNGGGTYWNSQQHTQKEKSLKKQVQRRIPGDSLKKPMW
DLAKLPVITKNLYIPHINVLKRSTDDVHKYHIGKEITVKGNNTPSPIQAFEESNFPDYVM
EEIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINNQPRLNRGD
GPIVLILAPTRELAQQIQTVAREFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPG
RLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEV
QALAEDFLSDYIQINIGSLTLAANHNIRQIIEICQEHEKETKLSSLLRQIGKDRGSKTII
FVETKKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLD
VENVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLKEAGQV
INPQLADLANSIKSAYGKSRQRWSHSRSNKDNSSTGSPRNNSSSPISNNWQTQHVQNTQH
SNGNSQERTVVRQQNGYQTSRPNSFQSNYQQHQHQQQQQQQQQQQQQQQQQHQHQQQQHQ
RQSNAYTNGCQTSNSYQASYQNANIPRYHGRTSGFQGNRYRQNAYSTNQTAGGQNVYSMP
PPFMMPSAGGHTDSGMQSLVNNKFFQTNRPPPNTGACAYQSMGYSQFQAVPPYSYPYPPT
PVQQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaatacgtattccaatcataccagttatagacccaggggaagtagaaattgt
agcagtcgtaatggaggaggaacgtactggaacagccagcagcatacacaaaaggaaaag
tcccttaagaagcaggtccaaaggagaattcctggggattcattgaaaaagcctatgtgg
gatttggccaagttaccggtgatcacaaaaaatttatatattccacatatcaatgttttg
aaaagatcaaccgatgatgttcacaaatatcacattggcaaagagatcactgtgaaggga
aacaatactccttctccaattcaagcgtttgaagaaagtaatttcccagattatgtgatg
gaagagattagaaagcagggttttgctgaaccaacagcaattcaggcacagggctggccc
attgcacttagtggacgcgacttagttggaattgctcaaactggatctggaaaaactcta
gcttatattttaccagcaacggtacacattaacaatcaaccacgtttgaaccggggagac
ggaccgatcgttttaatactcgcacctacaagagagctagctcagcaaattcagactgtt
gctagggagtttggttcctcgtcgtgcattcgtaacacttgcattttcggtggttccccg
aaagggcctcaagctcgtgatctagagcgcggcgttgagatatgtatcgcaactcctggt
agactaatcgatttccttgaaaagggaaccacgaacttgcgcagatgcacatacctcgta
ttggacgaggcagatagaatgttagacatgggattcgagccgcaaatccgaaaaatcatt
gaacaaattagacctgatagacaggtgctaatgtggtctgcgacatggccaaaagaagtg
caggcactggctgaagattttctctcagattacattcaaattaacataggttctcttaca
ttggccgccaatcacaatattcgtcagatcatagagatttgtcaggagcacgagaaagag
acgaaactttcaagtttattgagacagattggcaaggacagaggaagcaagacgattatt
ttcgttgaaacaaagaaaaaggtggatgatatcaccaaagctattaaacgagaaggttgg
ccggctatctctattcatggtgacaaatcgcaacctgaaagagattatgtattatctgag
ttcagaaatgggaaaacaatgattcttgttgctacagatgttgctgctcgtggtttggac
gttgaaaatgtgaagtatgtaattaactttgattacccgaacagttccgaggattatatt
catcgaataggaagaactggacgttgccaaagtgcaggcacagcatatgcttattttaca
cctaacaatgccagacaagcaaaggaattaatttctgttttgaaagaagccggtcaggtg
ataaatccgcaactggccgatttagcaaactcgataaagtctgcgtacggcaagagccgt
caacgttggagtcattcacgctctaacaaggacaatagttcaactggtagcccaaggaac
aatagcagcagtccaatttcaaacaactggcagactcaacatgttcaaaatactcaacat
agtaacggtaacagtcaagaaaggactgttgtacgccaacaaaatggataccagaccagt
cgtccgaatagctttcaatctaattatcagcagcatcaacatcaacagcagcagcagcag
cagcagcaacaacaacagcagcagcagcagcaacatcaacatcaacagcagcaacatcag
cggcaatcgaatgcctataccaatggctgtcaaactagcaacagttaccaagctagctat
cagaatgcaaatatacctagatatcatggaagaacaagcggctttcaaggcaatcgttat
cgtcagaatgcatatagtactaatcaaacagctggaggacaaaatgtatattctatgcca
cctccattcatgatgccatctgctggtggacacaccgattcaggaatgcaaagcctcgtt
aacaacaagtttttccagacaaatcgtccaccaccaaataccggcgcctgcgcatatcaa
tcgatgggatacagccagttccaagctgtaccgccgtatagttatccttatccgcccacg
ccggtgcagcagtaa
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