Frieseomelitta varia: 122534552
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Entry
122534552 CDS
T09482
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122534552
09123 Folding, sorting and degradation
03018 RNA degradation
122534552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122534552
03041 Spliceosome [BR:
fvi03041
]
122534552
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122534552
mRNA degradation factors
5'-3' decay
Lsm complex
122534552
Spliceosome [BR:
fvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122534552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
122534552
NCBI-ProteinID:
XP_043521246
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MTSSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttctgttagtacaaatccatcaacgttgttgcctctagaattagttgacaaa
tgcatcggttctcgaatacacatcattatgaagaacgataaagaaattgtcggcaccttg
ttgggtttcgatgatttcgtgaacatgttgctggaggatgtgacagaaagtgaagcaacc
ccggaaggacgaagagtcactaagcttgatcaaatattactcaatggaagcaatatcaca
atgcttgtgcctggtggagaaatgcccgatacataa
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