Frieseomelitta varia: 122534863
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Entry
122534863 CDS
T09482
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122534863
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122534863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
DUF4158
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
122534863
NCBI-ProteinID:
XP_043521813
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MICVHNSVCTDSRRSLDAKGYDRLQFVEGDMTVAGKKYVDYTVLETENIADAEDSSYDSD
YEAEDSVGSTNIHSQVELQVSTASHSNVSRTASDTLAAEFAEYVTVQESPPVQSPGYTAR
VEFALKLGYTERLLQTALEKLGPDPEQNELLAELIKLGASCSQKSVDTPEEADNVTDTDF
MSSENSGCSSSLRSVVIDGSNVAMSHGNNEIFSCRGIKICVDWFKARGHKEITVFVPKWR
KETSRIDNPIADQEILGELERDRLLVFTPSRLVGGKRMICYDDRYILKLAAEIDGIVVSN
DNYRDLAQENPEFRKVIEERILMYTFVNDRFMPPDDPLGRSGPTLDNFLKTFPQKTDPAP
PCPYAKKCTYGNKCKFRHPERGLHPQKSVTEKLVEHVQKQLQVKGSNPSVFASNNISSNT
YQHQPLCKTKSMVTTTIQSLPSVTKSRSAENVMLEQPINSTIHGSQVPSTTSSQGYRSPC
RSTGRMNKPETEPPNIHKKLQRQLTLNPVYDPRLHQLRQYQQTSQINSLSQQTVITSSTA
QHRSLTRHSSNESAYKVGMNWDHTEGGQHHQHVTRIASAPDSYQAWLSNNSNMTLPSGSN
QRLGASDSQLNVHISPLYSAMPPDMLRDFLDIRAKIHYHLSNVFPEEHVRTAMLIHPFET
DAVEICVAILKMYPQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtgtacataatagtgtttgtacggattcgagaaggtctttggacgcgaaagga
tacgatcgattacaattcgtggaaggagatatgactgtcgccggaaagaaatacgtagat
tataccgtcctagaaactgaaaatattgctgacgctgaagattcttcttacgatagtgat
tacgaggctgaagattcagtcggatctacaaatattcattcacaagtggaattgcaggtt
tctactgcaagtcactcaaatgtgtcccggactgcttcagatacattggctgctgaattt
gcagaatatgtcacggtacaagaaagtccgcccgttcaaagtccagggtacactgctcga
gtagaattcgcccttaaacttggatatacggaacgtttacttcagacagcgctagagaaa
ttgggtccagatccagaacaaaatgaacttttggccgagttgataaaactcggtgctagt
tgctctcaaaaatcagtcgacacgccagaagaggctgataacgtcacagacactgacttc
atgtctagcgaaaacagtggatgctccagtagtcttagatctgttgtaattgatggaagc
aacgtggcgatgagccacggaaacaatgaaatattttcttgtagaggaattaaaatttgt
gtagactggtttaaggctcgagggcacaaagaaatcaccgtgtttgtaccaaagtggagg
aaggaaacctctaggattgataatcctatcgctgatcaagaaattttaggagaattggaa
agggaccgtttgttagttttcactccatctagattagttggtggcaaaagaatgatttgt
tacgatgatcgttatatcttaaaactagcagcagaaattgatggtattgttgtcagcaat
gataattatagggatttggcacaggaaaatccagagtttcgaaaagttatagaagaaaga
attttaatgtatacctttgtaaatgatcgttttatgccaccagatgatccactaggtaga
agtggtcccacgttagataattttttaaaaacttttcctcaaaaaaccgatcctgcacca
ccttgcccatatgcgaaaaaatgtacttatgggaataaatgtaaatttcgacatcctgaa
agaggcctgcatcctcagaaatcagttacagagaaattagtagaacatgtgcaaaagcag
cttcaagtaaaaggttcaaatccaagtgtatttgcatcaaacaatatatcttccaataca
tatcagcaccaaccactttgtaaaaccaaatcaatggtaactactactattcagtcgtta
ccttcagttacaaaaagtagatcagcagaaaatgttatgcttgaacaaccaataaattct
actatacatgggtcacaagttccatctaccacaagttctcaaggttatcgttctccctgc
cggtcaacaggaagaatgaataaaccagaaacagaaccaccaaatatacataaaaaattg
cagagacagttgactttaaatccagtctacgatcctcgactccaccagctgagacaatat
caacaaacatctcaaataaattcattatcacagcaaactgtaataacatcttctacagca
cagcacagatctttaactagacattctagcaacgaatcagcctataaagttggcatgaat
tgggaccatactgaaggaggacagcatcatcaacatgtaacacgtattgcttcagcgcca
gattcttaccaagcatggttgtcaaataattcaaacatgactttaccatcaggatcgaat
caacgattgggtgcttcagattcacaattaaatgtccatatatctcccttatattcagct
atgccgccagacatgttaagggattttctcgacatcagagcaaaaatacattatcatttg
tcaaatgtttttcctgaggaacatgtgagaaccgctatgctaattcatccatttgaaaca
gatgcagtggaaatctgtgttgctattttgaaaatgtatccccaataa
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