Frieseomelitta varia: 122534904
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Entry
122534904 CDS
T09482
Name
(RefSeq) terminal nucleotidyltransferase 4B-like isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122534904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122534904
03016 Transfer RNA biogenesis [BR:
fvi03016
]
122534904
Enzymes [BR:
fvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122534904
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122534904
Transfer RNA biogenesis [BR:
fvi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122534904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
122534904
NCBI-ProteinID:
XP_043521904
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MDPTIGWYQPEQFGPAKDLWLHIWEAEKGLDILTLKNDSSSNVMGMKLQQDFISLDSLNS
RTGDRMQHNTCNSYYNPSRRKGDNRASTYGMNYNYDALVGEYGGCPWRVPNKHYSKSVIG
LHEEIEDFFAYMCPSNEEHSLRMRVVKRIEQVIYDLWPDSKVEVFGSFRTGLYLPTSDID
LVVIGMWTNLPLRTLERALLDQNIAEPSSIKVLDKASVPIVKLTDKETEIKVDISFNMNN
GVKSADLINSFKKRFPVLEKLVMVLKQFLLQRDLNEVFTGGISSYSLILMTISFLQLHPR
QNAYCSNANLGVLLIEFLELYGRKFNYVKTGIRVKDGGTYISKEEVQRDMIDGHRPSLLC
IEDPLTPGNDIGRSSYGALYVKDAFDWAYYVLSQAVSPLNILVNDANKVSILGRIIRVTD
EVIEYRKWIKETFPLPLSEADSLSSSTGSDASTLSAPASDTDSECSRGNSPNASGKGGDR
NKERHVYNNQHTHHHSQWKKPFKGTAHGNHHHSSRGNYHHRGINNNISGQSKAKHSLHSN
GNNNNSHSPSSRSQTVKRKKQCITPRGTGDCVR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggatccgactatcggttggtatcaaccggagcagttcggccctgctaaggatttgtgg
ttacacatttgggaagctgagaaaggcctggatattttaacgctgaaaaacgattcgtct
tcgaatgtaatgggcatgaagctccagcaagactttatatctttggattcgcttaattct
cgtacaggggaccgtatgcaacataatacttgtaatagctattataatccatcacgtagg
aaaggtgataatcgtgctagtacgtacggcatgaactacaattacgatgccttagttggc
gaatacggcggttgcccatggcgggtacctaataaacattattcgaaaagtgttattgga
ttacatgaagaaattgaagatttttttgcttatatgtgtccctctaatgaagaacatagt
ttacgaatgcgtgttgtcaaaaggatagaacaagtaatatatgatctgtggccagattct
aaagttgaagtatttggcagctttcgcactggtttatatttacctacaagtgatatagat
ttagtagtaataggaatgtggacaaatcttccattacgcactttggagcgtgctttattg
gatcaaaatatagctgaaccctcttctattaaagttttggataaagctagtgttccaatt
gtgaagttgactgataaagaaactgaaattaaagtagatatcagttttaatatgaataat
ggagttaaatctgcagatttgataaattcttttaaaaagaggttcccagtattggaaaaa
ctagttatggtattaaaacaattcttattacaaagagacctgaatgaagtgtttactggt
ggaatctcgtcatatagtttaatacttatgactatcagttttctacagttgcatcccaga
caaaatgcttattgctcgaatgctaatcttggagtactattaatagaatttttggaatta
tatggtaggaaatttaattatgttaaaacaggaattcgtgtaaaagatggtggtacttac
atatcgaaagaagaggttcaaagagatatgatagacggccaccgaccttctttattatgc
atagaagatccacttacacccggaaatgatattggtcgtagtagttatggtgctctatat
gtaaaagatgcatttgattgggcttattatgtcctttcacaagcagttagtcctttaaat
attttagttaatgatgcaaataaagtaagtatattaggaagaataatccgtgtgacagat
gaagtaatagaatatcgtaaatggattaaagaaacattcccactacctttgagtgaggca
gattcattgtcaagttctactggatctgatgcttcaacactatctgctccagctagtgac
acggattctgaatgtagtcgtggaaattctcccaatgctagtggaaaaggaggagacaga
aataaagaaagacatgtatataataatcaacatacccaccatcattcacaatggaaaaaa
ccatttaaagggactgctcatggtaatcatcatcatagttccagaggaaattatcatcat
cgtggaataaataataatataagtggacaaagtaaagcaaaacactctcttcatagtaat
ggaaataataataatagccacagtccaagttcaagatcacaaaccgttaaacgaaaaaaa
cagtgtattacacctcgtggtactggagattgtgtacggtga
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