KEGG   Frieseomelitta varia: 122535426
Entry
122535426         CDS       T09482                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
fvi  Frieseomelitta varia
Pathway
fvi03030  DNA replication
fvi03410  Base excision repair
fvi03420  Nucleotide excision repair
fvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122535426
   03410 Base excision repair
    122535426
   03420 Nucleotide excision repair
    122535426
   03430 Mismatch repair
    122535426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fvi03032]
    122535426
   03036 Chromosome and associated proteins [BR:fvi03036]
    122535426
   03400 DNA repair and recombination proteins [BR:fvi03400]
    122535426
DNA replication proteins [BR:fvi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122535426
  DNA Replication Termination Factors
   ELG1-RFC complex
    122535426
Chromosome and associated proteins [BR:fvi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122535426
DNA repair and recombination proteins [BR:fvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122535426
  Check point factors
   HRAD17(Rad24)-RFC complex
    122535426
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_24 Rad17 AAA_11 AAA_22 Mg_chelatase AAA_30 AAA_assoc_2 ResIII AAA_14 bpMoxR DUF815 ATPase_2 AAA_19 RuvB_N AAA_5 MCM DNAX_ATPase_lid SLFN-g3_helicase AAA_7 AAA_28 Gp44_lid EAL
Other DBs
NCBI-GeneID: 122535426
NCBI-ProteinID: XP_043522882
LinkDB
Position
Unknown
AA seq 357 aa
MQAFLKTGKLGPGDSKKASTSRSKEERSSPAAPWVEKYRPRTVEDVVEQAEVVEVLRQCL
KGGDFPNLLFYGPPGTGKTSTILAAARQLFGSLYKERILELNASDERGIQVVRDKIKSFA
QLTAGGVRDDGKSCPPFKIIILDEADSMTNAAQAALRRTMEKESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGEDKIVERLEYICKEEDLKAEKVVLLKIVEASGGDLRRAITCLQS
ITRLKGKGIDITVDDIVEIIGIVPDKWLDDLMNVCKTKDYSKAEEFVDQFMLEAYATSQV
IEQLSEKIIYSNELTDQQKALIADRLGECNYRLLDGGSEYIQLINLCCGIIKAYELV
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcttttctaaaaactgggaaattagggcctggtgattctaagaaggcttcgact
tcacgttcgaaagaggaacgtagcagtcctgcagcgccatgggttgaaaaatatcgacca
agaactgtagaagacgttgtggaacaagcagaggtagtagaagtattgcgacaatgtttg
aagggtggagattttccaaatctgttattttatggcccacctggaactggcaaaacaagt
actatattagctgcggctaggcaattattcggtagcctctacaaggaaagaatattggaa
ttaaatgcttctgatgaaagaggtatccaagttgtgagagacaaaatcaagtcttttgca
cagcttacggcaggtggtgtgagagatgatgggaaaagttgtccgcctttcaaaattatc
atcttagatgaggcagatagtatgactaatgccgcgcaagctgcactccgtcgtactatg
gaaaaagaatcacatagcaccagattttgtttaatttgtaattacgtatcaagaatcata
gaacctttgacttctcgttgtacgaaatttagatttaagccgttgggagaggataaaatc
gttgagagattagaatacatatgtaaagaggaagacttgaaagcagaaaaggttgtgtta
ttaaaaattgttgaagcttcaggtggagatttacgacgcgctataacatgtttacagtcc
attacaagattgaaaggcaaaggcatcgacattactgttgatgacatcgttgaaattatt
gggattgttcctgacaaatggttggatgatttaatgaatgtatgcaaaacaaaagattat
agtaaggcagaagaatttgtcgatcagtttatgttggaagcatatgctacgtctcaggtt
attgagcaactcagtgaaaaaattatatattctaacgaattaacagatcaacagaaagct
ctcatcgcagacagacttggggagtgtaattataggctgctagatggcggaagtgaatac
atacaactaataaatctttgttgcggtattataaaagcttatgaattagtataa

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