Frieseomelitta varia: 122535831
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Entry
122535831 CDS
T09482
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122535831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122535831
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122535831
mRNA degradation factors
3'-5' decay
Pan complex
122535831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
122535831
NCBI-ProteinID:
XP_043523614
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MDPSMFVAYTPQTNGVPLESKLATYMNRQSPGVTLNTTAVTKHLSNLSLDSQKKVTASPE
FVPGRGLTSSNSSSPNLFNNSYHSQENVGGTTYFYLGNAATDTVGTEEATETIGNVGAGQ
VGYVYPGTPAHLQPVKSTKPPSSNSSSAPSTPPPQATPSFFVSESLRMDILQKNALTLAQ
PDVVRFPDLPNEVDNYHELCPLEPIHKPASTMLGYQTSTYKATSIKSGTRYCLRRIHDFR
LANTKCMVLVDMWKRLSHTNLVQLREVFTTKAFGDHSMVFVYDYHPASETLLTKHFSATE
LNGYTDPFSSDPNAPRPYSHTKNTILRQQHSSMLPESVIWSYIIQLTAALRVIHAAGLAY
RCLDPTKVLLTSRTRLRLSCVAIPDVVTFDGNTANPLSLIPHYQQEDLIALGKLVLALAC
RSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQTRRSVTDLMPMIGARFYTQLDAA
QLRSDVLENEIAKELENGRLFKLLVKLATINERPELNMEPTWAETGDRYMLKLFRDYVFH
QVAADGRPWLDMAHVVSCLNKLDSGSQDKICLMSRDEQTVLVVSYAELRQCLETSFGELV
QSAKEAV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggacccatcaatgtttgttgcatacacccctcaaacaaatggcgttccattggagtcc
aagcttgctacctacatgaatcgtcaaagtccaggggtaactctaaatacaacagctgtt
acaaaacatttatcaaacctttctctggattcacagaaaaaggtaactgccagtccagaa
tttgtacctggtagaggtcttactagtagtaacagcagttctccgaatcttttcaataat
tcctatcattcacaagagaatgtgggtggtacaacatatttttaccttggaaatgcagca
actgatactgttggaaccgaggaagcgactgaaactattggaaatgtaggagcaggtcag
gtaggctatgtctatccaggtactcctgcacacctccagccagtaaaatctacaaaacct
ccatcatctaatagttcttctgccccttcaacccctcctcctcaagcaacccccagtttc
tttgtcagtgagagtttaagaatggacattctccaaaaaaatgctttaacgttagcacaa
cctgatgtagtacgatttcctgatctaccaaatgaggtggataattatcacgagttgtgt
ccattggaaccaattcataaacctgcttcgaccatgcttggatatcaaacttcaacgtac
aaagctaccagcattaagagcggaacacgttattgtctacgacgtatacatgatttcaga
cttgctaatacaaagtgtatggtgctggtagatatgtggaaacgattatcgcatacgaat
ttggtgcagttaagagaagtttttaccaccaaggcttttggtgaccattccatggtgttt
gtttacgattatcatcccgcatcggaaacattattaactaagcatttctcagcaaccgaa
ttaaatggttatacagatccattttcttcggatccaaatgctccccgaccttatagtcat
actaaaaatactattttaagacaacaacatagtagtatgctaccagaaagtgttatatgg
agctatataattcaactcactgccgcacttcgtgttatacatgctgctggtttggcatac
agatgtttagatcctacaaaagtgttactcacgtcgcgaacgagacttcgtttaagttgt
gtagctataccagatgttgttacttttgatggaaacacagcaaatccactttcgcttata
ccacactatcaacaagaagatttaatcgccttaggaaagttggtgttggcattagcatgt
cgcagtctccttgccgtccatcgcgacaacatgcaagcctcccttgagctcgtcgcacgt
tcctattctaccgatcttcgaaaccttatcctgtatttactttctaatcaaacacgaaga
agtgtaacagatctcatgccaatgattggagcacgattttatacgcaattagatgcagct
cagcttcgatctgatgtattggaaaatgaaattgccaaggaattagaaaacggaagatta
tttaagttacttgtaaaactggctactattaacgaaagacccgaacttaatatggaacct
acatgggcagaaactggtgatcgatacatgctcaaattgtttagagattacgttttccat
caggtagcagctgatggaagaccatggttggatatggcacatgttgtatcttgtttaaat
aagttagattcaggttctcaagataagatatgtcttatgtcgagagacgagcagactgta
ttagttgttagttatgcagagttacgacaatgtttggaaacttcatttggagagttagta
caatctgcaaaagaagctgtttag
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