Frieseomelitta varia: 122536006
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Entry
122536006 CDS
T09482
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fvi03009
]
122536006
Enzymes [BR:
fvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122536006
Ribosome biogenesis [BR:
fvi03009
]
Eukaryotic type
90S particles
Helicases
122536006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
122536006
NCBI-ProteinID:
XP_043523949
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MSKKKKVRLYNKKKKLSETTVIANLQSKYDTIDETKITKFTDLPLSTKTLKGLAENDYVE
MTDIQRQSIGLALRGCDILGAAKTGSGKTLAFLIPVLEILYCKQWTRLDGLGALVITPTR
ELAYQIYEMLRKIGHYHDISAGLIIGGKDLKFEKRRMDQCNIVICTPGRLLQHMDENPLF
DCVNMQVLVLDEADRCLDMGFEQTMNSIIENLPPKRQTLLFSATQTKSVRDLARLSLKDP
MYVSVHEHAAHTTPEALQQNYVVCALEDKISMLWSFIRNHLKQKIIIFFSSCKQVKYIYE
VFCRLRPGISLLALYGTLHQLRRMEIYNTFCRKQFAVLFATDIAARGLDFPAVDWVVQMD
CPEDVNAYIHRAGRTARFQRNGECLLVLLPSEEKMVEKLKTCKIPISMIQINPNKLQSPQ
RKMEALLARDVSLKETAQRAFVSYIKSIFLMKDKEVFNVHVLNTDSFARSLGLALPPRIR
FLQRMEQKRQLSNKNTEEKKPLTVNNELNDINEEMNDCKDDEQEIKSQSMNSTDFTLDDS
DDDIFTVKRKNINLDDVQIGITDKQDEGLNKKKAVTKAAAAKKVLRKMIVPNKKITFDDK
GEELLNPSKHKISELARQYENEEDSGINIEIAKQILHEEDKFDKQRFREKIKEKHKEKKR
KLKASKKIDDKNDQDETEDNISNYTSDDEYNGPDLSWLPDPDKIYGKQEENYSETQESEE
ESNIHRPSKRKLITQDEFKKKKKQKSLNVDNTDLKADEELVLQLLQN
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaaaagaaagtaagactttacaataaaaagaaaaaactaagcgaaacaaca
gtaattgcaaatctacaatctaaatatgatactatcgacgaaacaaaaataacaaaattt
acagatcttcccctttcaacaaagactttaaaaggtctcgcagaaaatgattatgttgaa
atgacagatatccagagacaaagtatcggattagcattacgtggttgtgatatattaggg
gcagcaaaaacaggcagtggaaaaactttggcatttcttattccagttttagagatatta
tattgcaaacaatggacaaggttagatggacttggtgcacttgttattacaccaaccaga
gaacttgcttatcaaatatatgaaatgttaagaaaaattggtcattatcatgatatttct
gctggccttattattggtggaaaagatctaaaatttgaaaaaagacgtatggatcaatgc
aatattgttatatgcactcctggtcgtttgttacaacatatggatgaaaatccattattt
gattgtgtaaatatgcaggtattggtattagatgaagctgatagatgtttagatatgggt
tttgagcaaaccatgaattctattattgaaaatttacctccaaaacggcaaactctttta
ttttctgctacacaaacaaaatctgtaagagacttggccagattaagtttgaaagatcct
atgtatgtatcagtccatgaacatgctgcacataccacaccagaagcacttcaacaaaat
tatgttgtttgtgctttagaagataaaatttcaatgttatggtcattcatacgaaatcat
ttaaaacaaaaaattattatatttttctctagttgtaaacaggtaaaatatatatatgaa
gtattttgtcgattaaggcctggtataagtttgctagcactttatggtactttacatcaa
cttagaagaatggaaatttataatactttctgtagaaaacaatttgcagtattgtttgca
actgatattgctgctcgtggattagatttccctgctgtggattgggttgtacaaatggat
tgccctgaggatgtaaatgcatatattcatcgtgctgggagaacagctagatttcaacga
aatggtgaatgtttgttggttttgttaccttctgaagaaaaaatggttgagaaacttaaa
acgtgcaaaattccaatatccatgatacaaattaacccaaacaaattgcaatctccacaa
cgtaaaatggaagcactattagcaagagatgtttcattgaaagaaactgctcagagagcg
tttgtatcatatataaaatcaattttcttaatgaaagataaagaggtctttaatgttcat
gtattaaatactgattcatttgcaagatctttaggtttagctctaccgccaagaattcga
ttccttcaaagaatggaacaaaaacggcaattatcgaataaaaatactgaagagaaaaaa
ccacttactgttaataatgaattaaatgatataaatgaagaaatgaatgattgcaaagac
gatgaacaagaaattaaatctcagtcgatgaattcaactgattttacacttgatgatagt
gatgatgatatattcaccgtgaaacgaaaaaatattaatcttgatgatgtacaaattggt
atcactgacaaacaagacgaaggtttaaacaaaaagaaagcagttactaaagctgcagca
gctaaaaaagttcttcgaaaaatgatagtaccaaataaaaaaattactttcgatgacaaa
ggagaggaattgctaaatccctctaaacataaaatttctgaactagctagacaatatgaa
aatgaagaagattctggaattaacatagagatagctaaacagatattacatgaggaagac
aagtttgataaacaacgttttagggaaaaaataaaagagaaacataaagaaaaaaaacga
aaattaaaagccagtaagaaaatagatgataaaaatgatcaagatgaaactgaggataat
ataagtaattataccagtgacgatgaatacaatggtccagatttatcttggttaccagat
ccagataaaatttatggcaaacaagaggaaaattattcagaaacgcaggaaagtgaagag
gaaagcaatatacataggccatctaaaagaaaactcataacgcaagatgaattcaaaaag
aaaaagaaacaaaaatctcttaatgtggacaatacagatttaaaagcagatgaggaatta
gtgttacaacttttacaaaattaa
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