Frieseomelitta varia: 122536252
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Entry
122536252 CDS
T09482
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvi03021
]
122536252
Transcription machinery [BR:
fvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122536252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_2
TPR_Trm732_C
ResIII
DEAD
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
122536252
NCBI-ProteinID:
XP_043524395
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MTSRLDRLFILLETGTNAVTKRAAAQQLGEAQRLHPHDLHHLLARVSILLKSQQWDTRVS
AAHAIQAILAQVPAWDPQPIKKETRTEDGETKRANNKLNLEDFDMEKVLARSLYLTGSEG
SEYDLIAADGEQMLLPNQEEKIAAKLGLHPRLMGVDTSELFTAEDLTPVVLPPTSNTQTK
VSVSETLKQPGGLSRREMNRARRKARQSVLKQRSREPDDYRNSEEYQNNSNVQSPINSTG
ESLNKKIKLEEVISSEIGVNYSTQTESNNGVPDGTGCWPDSLIDWPLESFVESLCQDLFS
QKWEIRHGAATALRELVKLHGKGAGKSRDQTAEKMAESHYRWLVDTALRLLCVLGLDRFG
DFVSDQVVAPVRETCAQALGSLLLLVPNQNDNENKNRGIIGILSVILKLLEHDEWEARHG
ALLALKYLLAVRDDLLDDILPRVIPAIMQGLSDPVDDVGAAAASALIPVASALPRLLKPS
ELEAIVIRLWELLHEQDDLAAACNSFMGLLAAILSLSSARTCLTPQPLSQVLPRLWPFLS
HSSSSVRKATLQTLQTLTGDDGAPNENKKERWGEGGGLVLQEALRHVFQRVLIEHVVAIQ
DVAERVWENLVVQSDLELLLHAACPLVSTWLCLAMQPEHVPFNPNLLMIVSTPNKGVKCN
QTVGICDGQADASNNGGNNTVGGNIKSISELKVYIGGIETVAQNIRKLNVVQARCRAGRM
LGLLSHYVVQPAPGVIYTPDIPSPSLCYAKVLLAHLNSRSALQRTVAGLTMSHWATVNNI
KPPAIPDILRKKLLECLNECVYYDEIATSFTRLLHDSRDYVATLKHYKLPVPIETNASGV
MTLDQIASLAGKPISKLCAMGSTTNSGGSNGNVNSNPSTIKLKPKLIESLEERRKALEVG
AADTAAQQLSYNVMSMAALAGAATMLHCLPSSPQPLNPLVKPLMEAIKREENEELQKLAA
KHLSYLVDLCVDRNPSPNAKISTNLCTFLCSDSEFTPRVNCNTDTDLFDGILTLNNRQKH
AERIAYNRGANSGLGGGRGPGRPPTTEIPLEELLACEEPEAKAARTRRRGATLALTAIAT
LFGAQLPTRLPHLWDLILPNILREEDKIDGRENTQEEVNQLIFGLQVLEVMAPSLDKALL
PPALECLSCLCKLLAHPYKAIRHMAARCIAVLATLDTEKIILHVTRRVIPLLETTGGEKI
YSTTVTAPNEVDSIRQGAAESLTCLVESLGVHIVPYAVLFMVPLLGRMSDQNQAVRLACS
ATFATLVQLLPLDPGAITDPPELVEKKAQERQFLEQLLNPRSIPDTEIVIPVAAELRSYQ
RQGLNWLNFLNRYRLHGVLCDDMGLGKTLQTLCILALDHHRNPHAPPSLVVCPPTLTGHW
VYEAEKFFETKDLSVLQYAGTPPERERLRPKVTYHRLVVASYDIVRKDIDYFETRQWNYC
VLDEGHVIKNGKTKSAKATKRLHANHRLILSGTPVQNNVLELWSLFDFLMPGFLGTEKQF
AAKYSRPILACREPKAGPKEQEAGALAMEALHRQVLPFLLRRNKEDVLQDLPPKITQDYY
CDLSPLQRMLYEDFRTRHSASLLSSTSCTSTGNDAHGGHVFEALRYLRNVCNHPKLVLSE
RHPLYTTVSNTLKQQKSTLAEIEHGAKLPALKQLLLDCGIGQPQQQQCRNSAAPGTTPDN
QPPQQQQLVSQHRALIFCQLKAMLDIVEKDLLRTHLPTVTYLRLDGSIPATQRHSVVARF
NADPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYR
LVTRSTVEEKIMGLQKFKLLTANTVISPENASLETMATDQLLDLFSLDNGKGKKSEIQDD
AMSKITGLPGISRSVLEILPELWEQQQYDDEYDFDSFLSTLKADNQ
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaggttggaccgattatttatactattggaaacagggacaaatgcagtaact
aaaagagctgcggcacaacaattaggagaagcacagagattacaccctcatgatttacat
catttattagcaagagtttctatccttttaaaatctcaacaatgggataccagagtttca
gctgcacatgctatacaagctatacttgctcaagttcctgcttgggatccacaacctatc
aaaaaagaaacacgtacagaggatggagaaacaaaaagagcaaataataaattaaatttg
gaagactttgatatggaaaaggttttagcacgtagtttatatcttactggatcagaaggc
agtgaatatgatttaattgctgctgatggggagcaaatgctacttcccaatcaagaggaa
aaaattgctgctaaattgggtcttcatccgcgattaatgggagttgatacatcagaatta
tttaccgctgaagatcttactccagtagtattaccacctacctcaaatacacagactaaa
gtatctgtgagtgaaacattaaaacaacctggtgggcttagtagacgcgaaatgaataga
gctaggcgtaaggcacgacaatctgttttaaaacaacgttcacgggagcctgatgattat
cgtaacagcgaagaatatcagaacaattcaaatgttcaatctcctatcaatagtacaggc
gaatcactaaataaaaaaatcaaattagaggaagtgatttcgtcagagatcggcgttaat
tacagtacacagactgaatcaaacaacggagtaccagatggtacaggttgctggccagat
tctctaatagattggcctctggaatcgtttgtagaaagtctctgtcaagatttatttagt
caaaaatgggagataaggcatggagcagcaactgctttacgggaactcgtaaaacttcat
gggaaaggtgcaggtaaatcaagggatcaaactgcagagaaaatggcagaaagtcattat
cgatggcttgttgatactgctttacgactactatgtgttttaggattagatagatttgga
gattttgtttccgatcaagtagttgccccggtacgagagacgtgtgctcaagcactaggt
tctcttttgttactagtgccaaatcaaaacgataatgaaaataaaaatagaggaattata
ggaatactttcagttatattaaaattgttagagcatgatgaatgggaagcaagacatggt
gccctacttgcactgaaatatttactcgctgtacgagatgatctgttagacgatatacta
ccgagagtaattccagccattatgcaaggcctttctgacccggtcgatgatgtaggcgct
gctgcagcaagcgcgcttataccagtggcatctgctctaccacgtttattaaaaccatca
gaactagaagcaattgtaattcgcctttgggaacttttacacgaacaagatgatttagca
gcagcatgtaatagttttatgggattacttgctgctatactttcgttgtcttcggcgcgc
acttgtctcacacctcagccattgtcgcaagttttaccacgattatggccattccttagt
cattctagttcgagtgtacgtaaagccaccttacagacattacaaacgttaaccggagac
gacggtgctcctaatgagaataaaaaagagcgatggggcgaaggaggcggacttgtattg
caagaagctctccgtcatgtttttcaacgagtgttaatagaacacgtagttgccatacaa
gacgtagctgaacgtgtttgggaaaatctagtcgtacaaagtgatctcgagcttttatta
catgcagcatgtcctcttgtcagcacgtggctctgtcttgctatgcaaccggaacacgtg
ccatttaatccgaacttactaatgatagtaagcactcctaataaaggagttaaatgtaat
caaactgttggtatttgcgatggacaagcagatgctagtaataacggaggaaataatact
gttggcggaaatataaaatccatatctgaattgaaagtttatatcggtggaatcgaaacc
gtagctcaaaacataaggaaattaaacgtagttcaggctcgttgtagagcgggacgaatg
ttaggattattatcgcattacgtagtacaaccagcaccgggtgttatttacacaccggat
atacctagtccttcactttgttacgctaaagtattactggcacatcttaattcgcgttcg
gcattacaacgcaccgttgcaggtttgacgatgtctcattgggcgactgtaaataacata
aaaccacctgcaataccagatattttaaggaagaaactattagagtgtttgaacgagtgt
gtatactatgatgaaatcgccacatcttttactcgcctattgcacgatagtcgtgattat
gttgccactctcaaacattataaattgcctgttcctatcgaaacaaatgcatcgggagtg
atgaccctcgatcaaattgcaagtcttgcaggaaaaccgatttcaaaactttgtgccatg
ggcagtacgacgaactccggaggatctaatggaaacgttaatagcaatcctagcacgatt
aaattgaaaccaaagttgatcgaaagtttagaagaaaggcgaaaagcattagaagtgggg
gccgctgatacagcagcccagcagctttcgtacaatgttatgtcaatggcggcactcgct
ggcgctgcaacaatgttacattgtcttccttcatctccacaacctcttaatccattggta
aaaccattaatggaagctattaaacgtgaggaaaacgaagaattacaaaaactggctgca
aagcatttgtcctatctagttgatctttgcgtagatagaaatccttctcctaatgcaaag
atatcaaccaatttatgtacattcctatgctcggatagtgaattcacacctcgtgtgaat
tgtaatacggacacagatctgtttgacgggattcttactttaaacaatagacagaaacat
gctgaaagaatagcttataaccggggagccaacagcggacttggtggaggcagagggcct
ggccgacctccgacaactgaaattcctttagaagagctacttgcttgcgaagaacccgaa
gctaaagctgctagaacacgtcgtcgtggagctactttggcacttactgctatagctacc
ctgtttggtgcacaattacctacacgtttgccacatctttgggatctaatattaccaaat
atattacgagaagaagacaaaattgatggccgtgaaaatactcaagaagaagtgaatcaa
ttaatttttggtttgcaagttttagaagttatggctcctagtcttgataaagctttgttg
cctcctgctttagaatgcctctcatgtttatgtaaattattggctcatccttataaagcc
attaggcacatggcagccagatgtatcgctgtactagctacattagatacggagaagata
atactacacgtaacacgccgtgtaataccacttctcgaaacaaccggtggagagaaaata
tattcaacaactgtaacagcaccaaatgaagttgattcaataagacaaggcgcagctgaa
tcgttaacgtgtctcgtcgaaagtttaggagttcatattgttccgtacgctgtattgttt
atggttcctttacttggacgtatgagtgatcagaatcaggctgtaagattagcttgtagt
gccacgtttgcaacactcgtacaacttttacctcttgatcctggtgcgattacagatcca
ccagaattagtagaaaagaaagcacaagagcggcagttcttagaacaacttttgaaccca
cgcagtatcccagataccgaaatagttattccagtagctgcagaattgcgttcgtatcaa
cgacaaggcttgaactggttaaacttcttaaaccgttatcgacttcatggagttctatgt
gatgacatgggtcttggaaaaacgttacaaactctttgtatattagcgctggatcatcac
cgtaaccctcatgctccgccaagtttagtagtctgtccaccaactctgactggtcactgg
gtgtatgaagcagaaaagttcttcgaaaccaaagatctctcggtgttacaatatgctggt
accccaccggaacgtgaaagattacgtccaaaagttacttatcacaggctcgtcgttgca
agttatgacatagtgcgtaaggatatcgattatttcgaaactcgacaatggaactactgt
gtgctcgacgaaggccacgttatcaaaaatggaaaaacgaaaagtgcgaaggcaactaaa
cgattgcacgcgaatcacagacttatactctcggggacaccagtacaaaataacgtactt
gaactatggtccttgtttgactttctaatgccaggtttcttgggtactgaaaaacaattt
gcggcaaaatattcgcgtcctatactagcctgtagagaaccaaaagctggcccgaaagaa
caggaagcgggggccttggcaatggaagcacttcatagacaagttttgccattcttactt
agacgaaataaggaagatgtcctccaagatttaccacccaaaattacgcaagattattat
tgtgatctatcacccttacaacgtatgctatatgaggatttccgtactcgacattctgca
agtttattatccagtacatcgtgtacttcaactggaaacgatgcacatggtggtcatgtt
ttcgaagcattacgatatctgcgtaatgtttgcaatcatccaaaattagtattaagtgaa
cgacatccgttatacacaacagtatccaatacgttgaagcaacaaaagagtacgttagca
gagatagaacacggagccaagttacctgcattaaaacagttgttattagattgcggcata
ggacaaccacaacaacaacaatgtcgtaattctgcagctcctggtactacaccagataat
caaccaccgcaacaacaacaattagtgagccaacatcgagctctaattttctgtcaattg
aaagcaatgttagatatcgtagaaaaagatcttcttcgtacacatctaccaactgttaca
tatcttcgtctcgatggaagtataccagcaacgcaaaggcattccgtagtagcacgtttc
aacgcagacccatcgatagacgtgcttctgcttacaactcaagtcggtggtcttggactg
aatttaactggtgcagacactgttatattcgtggaacatgattggaatcctatgaaagat
cttcaagcaatggatcgagcacatcgtattggacaaaagaaagtagtgaatgtgtatagg
ttagtcacgagatcaacagtagaagagaagattatgggtctgcaaaaattcaagcttctt
actgcaaatactgtgatttcaccggaaaacgcgtctctagaaacgatggctaccgatcag
ttactagatttgttttcattggacaatggcaaagggaaaaaatcagaaatacaggatgat
gctatgtctaaaattactgggttgccaggcattagccgctctgttttagaaatcctccct
gaattatgggaacaacaacaatatgatgatgaatacgatttcgactcatttctatctact
ttaaaggctgataaccagtga
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