Frieseomelitta varia: 122536308
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Entry
122536308 CDS
T09482
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fvi03016
]
122536308
Enzymes [BR:
fvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
122536308
Transfer RNA biogenesis [BR:
fvi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122536308
Prokaryotic type
122536308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
122536308
NCBI-ProteinID:
XP_043524508
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MFSSKYRIKNSLTFFCSRLQYVNSNYKNMSVEVKNVVQNDYETSDVVATNKRQKLDENYE
IVKRALDVKAAGDIVEKKNFSKRKNFVIMLGYRGRDYFGMQINRGTKTIEESLLSALLEA
NFITKDQFEDVRLLRFQRAARTDKGVSAVRQIVSLLLPQEVNKEDINKHLPNDIRVFDIQ
RVIKTFNSKSKCDSRTYRYVFPTFALAPEDPNFLKLDIDEVDEVDEEQRLKDLFLINEKP
YNEFRLTPEMLDKLNNILKLFEGTHNFHNFTSKIRPLDPSAKRYIIHFRCIETFVANNME
FAVLEVKGQSFMLHQIRKMVSLVIGICRNIVSSDFVKDVFSLEKYDIPIAPGLGLSLHFV
HYSYYNKRYGKDGIHKTLEWQDCNEEVEKFYKEYILQDIIDTETSNNVMLNWLAIYLTPK
RFASKEFVAYEDIE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttttccagcaaataccgcatcaaaaatagtttaaccttcttttgttcaagattacaa
tacgttaatagtaactataaaaacatgtcagtcgaagttaaaaatgttgtacaaaatgac
tatgaaacatctgacgttgtggcgactaataaaaggcagaaacttgatgaaaattacgaa
attgtaaaaagagcactagacgtgaaagcagctggggatatagtagaaaagaaaaacttt
tctaaaagaaagaactttgtaataatgctcggttatcgtggtagagattattttggtatg
cagattaatcgtggtacaaaaactattgaggagagtttattatccgcattattggaagca
aattttattacaaaggatcaatttgaagatgtgagactgcttagatttcaaagagctgca
cgtacagataaaggtgtatcagcagttaggcaaattgtttctttactattaccccaagag
gtaaataaagaagacataaataagcatcttccaaatgatatcagagtatttgatatacag
agagtaataaaaacttttaatagtaaaagtaaatgtgatagtagaacatacagatatgtt
ttccctacatttgctttggctccagaggatccaaattttttaaaacttgacatagatgaa
gtagatgaagtagatgaagagcaacgacttaaagatctgtttctgattaatgaaaagcca
tataatgaatttcgattaactccagaaatgcttgataagttaaataatattttaaaatta
tttgaaggcacacataattttcataattttacatcaaaaataagaccattagatccgagc
gccaagcgttatataatacatttccgttgtattgaaacgtttgttgcaaataatatggaa
tttgctgtattggaagtgaagggacaaagttttatgttacatcaaattagaaaaatggta
tctttggtaatagggatttgtagaaatatcgtgtcaagcgattttgtcaaagatgtattt
tcattagaaaaatatgacattcccattgcaccaggcttaggattgagtttacattttgta
cattattcatattataataaaagatatgggaaagatggaattcacaaaacattagaatgg
caagactgtaatgaagaagtcgaaaaattttataaagaatacattctacaagacataata
gatacagaaacttcaaataacgttatgttaaattggttggcaatttacttaacaccaaag
aggtttgcatctaaagaatttgtagcatatgaagatatagaataa
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