Frieseomelitta varia: 122536745
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Entry
122536745 CDS
T09482
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
fvi
Frieseomelitta varia
Pathway
fvi03430
Mismatch repair
fvi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122536745
03460 Fanconi anemia pathway
122536745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122536745
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122536745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122536745
NCBI-ProteinID:
XP_043525309
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MTEPIPSLEKSKKINAINKQTIHQICSGQVILDLATAVKELVENSLDSGATLIDIKLKDY
GKTCISVSDNGSGVLEEDFEGLGLKHYTSKLREFSDLTEVNTFGFRGEALSSLCSLADLS
IITKHCTSKHGFKLQFDHNGMLQKKEPCARETGTTVHIKNIFKCFSVRAREFQRNLKKEY
VHAIQVLYSYCLISTNTKITCFNCVSNKSPNLVVSTTSPSNILNNINLIFGKKSSTGLIK
VELSPADETTLQEYNLSNNTIMDFEWDCYISSCDHDMGRSAPDRQFFYVNDRPCDLTKVS
KLINQIYHRYNNKQYPFVFLNLKLNKHSTDINVTPNKRTIFCTQERLILATLKYNLTSEW
EKLQGNLTVNPVPELNFSVKRTISPTNECRPTKRFHNLNTSNIHSKYTETQNIQCINENK
TIQYDNDNVQNNITNQAKIIDDIEMPISILTIKQQLQKKQKLLPKCIVSSTRIKFKAQMD
QNSKAENELKRQLTKNSFLEMEIIGQFNLGFIITRLKEDLFIIDQHATDEKYRFEKLNNE
TQLKTQKLIVPKFLNISALNETILIEHQKTFEDNGFFFKINTEAESGHRVQLTGIPVSGS
WQFGQEDIEELIFLIREGGIENKDKNIFRPSRVRQMLASRACRKAVMIGTALNNNDMHKL
VIQMAQMENPWSCPHGRPTIRHLLSLDLISK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccaattccatcgttagaaaaatcgaagaaaattaatgcaataaataaacag
acaattcatcaaatttgttctggtcaggtaatacttgatcttgcaactgctgtgaaagaa
cttgtagaaaatagcttagatagtggtgctacattaattgatattaaattgaaagattat
ggaaagacatgtatcagtgtcagtgataatggaagcggtgttttagaagaagattttgaa
ggactaggattaaagcattatacttctaaacttcgggaattctcagatttaacagaagtg
aacacttttggatttcgaggagaagctcttagttcactttgttcattagctgacttaagt
attattacaaaacattgtacaagtaaacatggttttaagctacaatttgatcacaatggc
atgctacaaaaaaaagaaccatgtgcaagagaaacaggaactactgtgcatataaaaaat
atatttaagtgtttttctgttagagcaagagaatttcaaagaaatcttaagaaggaatat
gttcatgctattcaagtactgtacagttattgcttgatttctactaatacgaaaataaca
tgttttaattgtgtatcaaacaaatctcctaatcttgtagttagtactactagtcccagt
aatattttaaacaatataaacctaatatttggtaaaaagtcttccactggattaattaaa
gttgaattgtcacctgctgatgagacaacattgcaagaatataatttatcaaataataca
attatggattttgaatgggactgctatataagtagttgtgatcatgatatgggacgctct
gctcctgacagacaatttttttatgtaaatgatcgaccatgtgatctgacaaaagtcagt
aaattaataaatcaaatttatcacagatataataataaacaatatccatttgtttttcta
aatttaaaattaaataaacactcaactgatattaatgtaactccaaataaaagaactatc
ttttgtacacaagaacgtttaattttagcaactttaaaatataatttaacatctgaatgg
gagaaattacaaggaaatttaactgtaaatcctgtaccagaattaaattttagtgtaaaa
agaacaatttcacctacaaatgaatgtcgaccaactaaacgatttcataatttaaataca
tcaaatatacattcaaaatatacagaaacacaaaatatacaatgtattaatgaaaataaa
actattcaatatgataatgataatgtacaaaataacataacaaatcaggcaaaaataata
gacgacatagaaatgccaattagcattctaacaataaaacaacaacttcaaaagaaacaa
aagcttttacccaaatgcatagtttcaagtacaaggatcaaatttaaggcacaaatggat
caaaattcaaaggctgaaaatgaattgaaaagacaattaacgaaaaattcgtttttagag
atggaaattataggtcaatttaatcttggttttataataacacgtttgaaagaagatctt
ttcattattgatcaacatgctactgatgaaaaatatcgttttgaaaaacttaataatgaa
acgcagttaaaaactcaaaaattaattgttcctaaatttttaaatatttctgcacttaat
gaaacaatattaattgaacatcaaaaaacgtttgaagataatggtttctttttcaaaata
aatactgaagccgaatctggacatcgtgtacaactgactggtataccagttagtggttct
tggcagtttggacaagaagacattgaagaattaattttcctgattagagaaggtggtata
gaaaacaaagacaaaaatatatttcgtccaagtcgagtaagacaaatgttagcatcaaga
gcttgtcgcaaggcagttatgattggtactgctcttaataataatgacatgcataaatta
gttattcaaatggcacaaatggaaaatccttggagttgtcctcatggtagaccaacaata
agacatttattatcattggatcttatatctaaataa
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