Frieseomelitta varia: 122536875
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Entry
122536875 CDS
T09482
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122536875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122536875
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122536875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122536875
NCBI-ProteinID:
XP_043525567
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MDSQYKIIHPVKYLQDHLAQDVRPDGRQFLSFRPISVNISSITHADSSAIFKIGNTTIVC
GIKAELAAPKAESPEYGYIVPNIELPPLCSPKFRPGPPSDQAQVVVKLIENILRNSAAID
LKDLCVFKGKLAWVLYCDLVCINYDGSIIDACIGALTATLNTLTLPETLYNIETGSVSVN
YTKRLKFPIKALPVSVSFAIFNDQLLVADPTDDEESLCLGRLTIVMNEDKICCIHKPGGI
PISQDLFLKSLTKCKKRAELIRSLIDAAVSTIKQEHLNE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaatacaaaattatacatcctgtaaaatatttgcaagatcacttggcacaa
gatgttcgaccagatggtaggcaatttttatcttttcgcccaataagtgtaaatatatca
tcaattactcatgctgatagctcagctatattcaaaattggtaatacaacaattgtatgt
ggtattaaagctgaattagcagcacctaaagcagaatctccagaatatggttatatcgtg
ccaaatatagaacttcctccattatgttctcccaaatttagaccaggtccaccaagtgat
caagcacaagttgttgtaaaattaattgaaaatattttgagaaattcagcagctattgac
ttgaaagatctttgtgtctttaaaggtaaactagcatgggtcttatattgtgaccttgtg
tgtattaattatgatggttcaataatcgatgcttgtattggagcattgacagctacactt
aatactttaactttacctgaaacactttataacatagaaactggaagtgtatctgtaaat
tatacaaaaagattaaaatttccaattaaagcattaccagtgtctgtaagctttgcaata
tttaatgaccaattattggttgctgatcccactgatgatgaagaaagtttatgtttagga
agattgacaattgtaatgaatgaagacaagatttgttgcatacacaaacctggtggaatt
ccaatttcgcaagatttatttttaaaaagcttaactaaatgtaaaaaaagagcagaatta
ataagatcactaattgatgctgctgtgtcaacaattaaacaggaacatttgaatgaatga
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