Frieseomelitta varia: 122537063
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Entry
122537063 CDS
T09482
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
fvi
Frieseomelitta varia
Pathway
fvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122537063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122537063
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122537063
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122537063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
Motif
Other DBs
NCBI-GeneID:
122537063
NCBI-ProteinID:
XP_043525908
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWLASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLANSIDALNLQLDTFESEIESLLAGKKKRLDKDKQDRMDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNSQASIPTTGSTATIKSNLLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHTNSQAIHSTSSKTSSHTNENGLLSSSSASSVTSNVPQTISQQHNNPAPIQTTHVL
HNQQNQNHNSETEMTTPIPPSSSPQSSVSSRSSPLPANSCSPAPSTANGLIPKLPDGMSS
LKSIAQQVIVRAGLEIPPSESNRNIFDSAKANNNNSNATSEAHIPPLLGVAPLGPVPLQK
EHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNLCPTPPYYQQVQLPHSDTVEFFQRLSTE
TLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDY
EKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgagatagatcggtgccttaaaaaagtaacagag
ggtgtagagacatttgaggatatttggcagaaagttcataatgctacaaatagcaatcag
aaggaaaaatatgaagcagatctcaagaaagaaatcaaaaaactccagaggttacgtgat
cagattaaaacctggcttgcatcaggtgaaattaaggataagagtacacttctcgaatat
agaaagttaatcgaaactcaaatggaaagatttaaagttgtggagagggagacaaaaacg
aaagcttattcgaaagaaggattgggagccgctcaaaaacttgatccagctcaaaaagaa
cgagaagaagttagcaattggcttgcaaattctatagatgctttaaatcttcagctggat
acatttgagtctgagatagaatcgttacttgctggaaagaaaaaaaggttagataaagat
aagcaggataggatggatgagttgaaagcaaaactcgataaacatcgttaccatatccgt
aaattggaaacattgttacgcatgttggacaatatgtctgttgaagttaatactattaaa
aggataaaagatgatgtagagtattatatcgaatcctcgcaagaacctgattttgaggaa
aatgaatatatttatgatgatattattggtcttgatgaagttgagttgtctggagttggt
attccctcgtcagcaactacagatagtaataatagtaatgagactggaggtacaccaacc
tcaactaattctggtacttcacctataccgtcacctccattgagttccactatgcacaat
cattcaagtgatagttctacagataatgacaaaaaaacgaagcctgtgaaaccaacagca
gtcagaccattattaaattcacaggcgagcattccaaccacgggaagcactgccaccata
aaatcgaatttattatcaagcagcactccaagcaagaccattcccatgacgcctagccat
agctcgcctagttctacaagtaatcacattgctacaactaatgctggcaattttgctacg
gtagctgcttcgcatactaattcacaagccatccattctacctctagtaaaacatcttct
cataccaatgaaaatggtttattgtcatcatcgtccgcgtctagtgttacctcgaatgtg
ccacaaacgatctcgcagcagcacaacaatccagcgcccatacagacgacacatgtgttg
cacaatcaacaaaatcagaatcacaatagtgaaactgaaatgacaacgccgatcccacca
tcttcttcgccacaatcgtcagttagcagtagatcttcgcctctgcccgcaaattcctgc
tcgccagcgccatccactgccaatggtctcatccctaagcttcctgatggcatgtcctct
ttgaaatctatagcccaacaagtaattgtccgagcaggtctggaaataccaccgtccgag
tcgaacagaaacatctttgacagcgctaaggcgaacaataataacagcaatgccacctcg
gaagcacacattcctcctctacttggcgttgcacctctcggaccagtacctcttcagaaa
gaacatcagctgcagttccagatgatggaggccgcttattaccatatgcctcatccgtct
gattctgaacgtttacgatcatatttaccaagaaatttatgtccaacacctccttattat
caacaggttcaacttccccactctgatactgtggagttcttccaacgtctttccacggaa
acattattcttcatattttactacatggaaggctctaaaggccagtacctggctgcaaaa
gctttaaagaaacaaagttggaggtttcatacgaaatatatgatgtggtttcagaggcac
gaagaaccaaaagtgattaacgaagaatacgaacagggaacttacatttattttgattat
gaaaagtggggacaaagaaaaaaggaaggttttacatttgagtacaagtacttagaggac
agagatctgaattaa
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