Frieseomelitta varia: 122537325
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Entry
122537325 CDS
T09482
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
fvi
Frieseomelitta varia
Pathway
fvi03022
Basal transcription factors
fvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122537325
09124 Replication and repair
03420 Nucleotide excision repair
122537325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fvi03021
]
122537325
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122537325
Transcription machinery [BR:
fvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122537325
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122537325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
122537325
NCBI-ProteinID:
XP_043526379
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSNTISGKNLLRPTGLQCKNLQEYLKSRPPEVLNKLYHNPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLHFEEHQKVVLILNELNVWKEASIPGGLPGWILNTTFKKNL
KIVLLGGGKPWTMSNQLEIDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLETALQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDPEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITAAQIVGYLQQHAHSKMIEAGPPILPPTIVDQIKLWENERNRFIFSEGVLYSQFLSQT
DFEVLRDHALSTGVLIWQSERKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatacaataagcggaaagaacttattacgacctacagggttgcagtgtaaaaat
cttcaagaatatttaaaatcacgtccaccagaggtgttaaataaattatatcacaatcca
ccaatttgtttggcagtatttcgtgaattgccagtaatagcaaaacattatgttatgcgg
ttattatttgttgaacaacctgtacctcaagcagttattgcctcttggtgctctaaactt
catttcgaagaacatcaaaaagtagttttgatattaaatgaactgaatgtatggaaagaa
gcatcaataccaggtgggctacctgggtggattttaaatactacattcaaaaaaaactta
aaaattgtccttttgggaggtggaaaaccatggacaatgtcaaatcaattagaaattgat
agtaaacctagagatgttgcatttttagattcatatgcattagaaaggtgggaatgtgtt
ttacattacatggttggttcacaacagcaagaaggtatatctgctgatgctgttagaatt
cttttacatgctggtctaatgaagcgagatgaagctgatggaagtccagtcattacacaa
gcaggtttccaatttttattactggaaactgcattacaggtgtggtatttcattttacaa
tatctagatacaatagaagcaagaggacttgacttagttgagtgtcttacttttctattt
caattaaatttttcaactctcggtaaagattacagtactgaaggaatgtctgaaggtctg
ttaacatttttacaacatttaagagaatttggtttagtttatcaaaggaaacgaaaagct
ggaagattttaccctacaagattagcactaaatattgcaactggacaaaataaaccattg
tctagagatccagagaaggaaggatatattgttgttgaaacaaattacagggtatatgct
tatacaaactcaaatttacaggttgctttacttggtctattttgtgaaatgttatatagg
ttcccaaacttggttgtatcaatattaacaagagattctgtacgtcaagctttaaaaagt
ggaattactgctgcacaaattgtaggttatttgcagcaacatgctcatagtaaaatgata
gaagcaggtcctccaattttacctcccactatagtagatcaaattaaattgtgggaaaat
gaaagaaatagatttatatttagtgaaggggtgttgtatagtcaatttctctctcaaact
gatttcgaagtgcttagagatcatgctctttctactggagtactaatttggcaaagtgaa
agaaaacggactatggtagttacaaaagcaggtcatgacgacgtaaaaaaattttggaaa
cgatattccaagggttccagttag
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